AMCG00008468 (eif3g)


Basic Information

Item Value
gene id AMCG00008468
gene name eif3g
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 1891096 ~ 1894227 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008468
GCTCGGGCCGGATCGATTAAGCTCGGCTGCCTTCGTGATTCTCGCTCTTTCTGCGCGCTGAGCTACGGGCCGGGATGCCGTCTGGTGAATACGACTCCAAGCCCAGCTGGGCCGACCAGGTCGAGGAAGAAGGCGACGACTCGGGGACGCTCCCCTCGCCGAAGGAAACGATCAAAGGCAACATCAAAACCATCACAGAGTACAAGATCGACGAGGATGGCAAGAAATTTAAGATTGTCCGCACGTTCAAAATCGAGACCAGGAAGGCCTCTAAAGTTGTTGCCCGGAGAAAGaactggaagaagtttGGGAATTCCGAGTTCGACCCTCCCGGCCCCAACGTGGCCACCACCACGGTCAGCGACGATGTCTTCATGACCTTCATCTCCAGCAAAGAGGATCTGAACAGCCAGGACCTGGAGGAAGATCCCATGAACAAGCTGAGGGGCCAGAAGATCGTCTCCTGTAGGATCTGTAAAGGAGACCACTGGACCACCCGCTGTCCGTACAAGGACACGCTGGGCCCCATGCAGAAGGAGCTGGCCGAGCAGCTGGGTCTTTCCACCGGGGACAAGGAGAAGACCTCTGAGCCTGAGCCGGCACAGCCAGCACAGAGCAAGACCGGGAAGTACGTCCCCCCCAGCCTGCGGGACGGGAGCACTCGCCGAGGGGAGTCCATGCAGCCCAACCGCAGAGCGGACGACAATGCCACGATCCGCGTGACCAACCTGTCGGAGGACACCAGGGAGACGGACCTGCAGGAGCTGTTCCGCCCGTTCGGATCCATCTCCAGGATCTACCTGGCCAAGGACAAGAACACCGGCCAGTCCAAGGGCTTCGCCTTCATCAGTTTCCACCGGCGCGAGGACGCGGCCCGAGCCATCGCCGGCGTGTCCGGCTTCGGCTACGATCACTTGATCCTGAACGTCGAATGGGCCAAGTAA

Function

symbol description
eif3g Predicted to enable RNA binding activity. Predicted to contribute to translation initiation factor activity. Predicted to be involved in translational initiation. Predicted to act upstream of or within translation. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 3 complex. Orthologous to human EIF3G (eukaryotic translation initiation factor 3 subunit G).

NR:

description
PREDICTED: eukaryotic translation initiation factor 3 subunit G

GO:

id name namespace
GO:0001731 formation of translation preinitiation complex biological_process
GO:0006446 regulation of translational initiation biological_process
GO:0005852 eukaryotic translation initiation factor 3 complex cellular_component
GO:0033290 eukaryotic 48S preinitiation complex cellular_component
GO:0016282 eukaryotic 43S preinitiation complex cellular_component
GO:0000166 nucleotide binding molecular_function
GO:0003743 translation initiation factor activity molecular_function

KEGG:

id description
K03248 EIF3G; translation initiation factor 3 subunit G

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008468 True 944 mRNA 0.60 9 1891096 1894227

Neighbor

gene id symbol gene type direction distance location
AMCG00008460 NA coding upstream 1329 1884367 ~ 1889767 (+)
AMCG00008458 NA coding upstream 10134 1874037 ~ 1880962 (+)
AMCG00008461 NA coding upstream 89338 1796344 ~ 1801758 (+)
AMCG00008459 NA coding upstream 95294 1794811 ~ 1795802 (+)
AMCG00008454 NA coding upstream 153581 1718172 ~ 1737515 (+)
AMCG00008472 NA coding downstream 136561 2030788 ~ 2046937 (+)
AMCG00008478 NA coding downstream 362230 2256457 ~ 2257456 (+)
AMCG00008479 pde4a,LOC107703358,LOC107725012,LOC107587971,LOC107674699,LOC107596808,LOC108243727 coding downstream 382564 2276791 ~ 2277090 (+)
AMCG00008484 NA coding downstream 500837 2395064 ~ 2402598 (+)
AMCG00008485 NA coding downstream 526113 2420340 ~ 2422009 (+)
G49261 NA non-coding upstream 34840 1799861 ~ 1856256 (+)
G49270 NA non-coding upstream 42358 1815584 ~ 1848738 (+)
G49271 NA non-coding upstream 52092 1838186 ~ 1839004 (+)
G49264 NA non-coding upstream 85069 1803825 ~ 1806027 (+)
G49236 NA non-coding upstream 149519 1642430 ~ 1741577 (+)
G49294 NA non-coding downstream 14596 1908823 ~ 1910419 (+)
G49321 NA non-coding downstream 269092 2163319 ~ 2208477 (+)
G49341 NA non-coding downstream 318202 2212429 ~ 2213493 (+)
G49431 NA non-coding downstream 550958 2445185 ~ 2464667 (+)
G49541 NA non-coding downstream 917947 2812174 ~ 2812893 (+)
AMCG00008451 ubl5 other upstream 262763 1625294 ~ 1628333 (+)
G49208 NA other upstream 566827 1322811 ~ 1324269 (+)
AMCG00008423 NA other upstream 922513 965838 ~ 968583 (+)
G49013 NA other upstream 1011583 876554 ~ 879513 (+)
G48846 NA other upstream 1302650 587280 ~ 588446 (+)
G49298 s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 other downstream 36427 1930654 ~ 1936502 (+)
AMCG00008473 NA other downstream 168329 2062556 ~ 2075649 (+)
AMCG00008475 NA other downstream 194253 2088480 ~ 2107792 (+)
AMCG00008476 NA other downstream 233488 2127715 ~ 2143394 (+)
G49340 cdc37 other downstream 315256 2209483 ~ 2211514 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025772 eif3g coding NC_007114.7 CM002887.2 54581987 ~ 54589823 (+)
mexican tetra (Astyanax mexicanus) G333926 eif3g,LOC107711270,LOC107754044,LOC107672439,LOC107670490,LOC107596845 misc NW_019172924.1 APWO02000101.1 6276569 ~ 6285881 (-)