AMCG00008474


Basic Information

Item Value
gene id AMCG00008474
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 2073783 ~ 2085025 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008474
ATGACCACCCCTGCCACACACGCCCGGCGCCATTGTGGAGAGCACCGCGCCGGCCCGGGCTGTAAGCAGTGTGAGCGGCTGCGTGGAGAGACTCAGACACCGGACACAGCCGCTCCTCCCAGCCGCTCCGTGCGTGTGACGGACACAGAAGACCCTCCGAGCCGCCGCCATGGCCCGGGCCGCGCTGCCCCTGTGCGCCGCCCTGAGTCTCCTGCGCTGCGGTCTCTGGgtccctgtgtctctgggtccctgtgtctctgggtCCCTGTGTCTCCggctgctgctgcagacTGTCCCATTGTGATTGACCCTCCCACAGTGGTGGTAAGATATGGAGATCCATCATCGGCCAACTGCACTGCAACACGGACAACCAGAGGAATGGGCTGGGAGGCATCGGTTGGATCCATAGACATGCAGACGGGTCCCCAGTCTCTCGTCTGGAGCGTCAGCAATCTGACTGACTGGGCTGTAGAGCCCAAATGCTACGCAAACTTTGATACGGAGCCAAAGCAGTGTTTGAAAAAGCTCAACATCCTTCTCTACAtaAGTCTCATGTTGCATTCCTCTGCTGTTCTGCTGGTCCCAGCAGTTCCTCAGGTCTCTCCTCTTTCGGTAAACAAAGACACCAACTCCTATGAGTATTAG
>TU61772
ACGCCCGGCGCCATTGTGGAGAGCACCGCGCCGGCCCGGGCTGTAAGCAGTGTGAGCGGCTGCGTGGAGAGACTCAGACACCGGACACAGCCGCTCCTCCCAGCCGCTCCGTGCGTGTGACGGACACAGAAGACCCTCCGAGCCGCCGCCATGGCCCGGGCCGCGCTGCCCCTGTGCGCCGCCCTGAGTCTCCTGCGCTGCGctgctgctgcagacTGTCCCATTGTGATTGACCCTCCCACAGTGGTGGTAAGATATGGAGATCCATCATCGGCCAACTGCACTGCAACACGGACAACCAGAGGAATGGGCTGGGAGGCATCGGTTGGATCCATAGACATGCAGACGGGTCCCCAGTCTCTCGTCTGGAGCGTCAGCAATCTGACTGACTGGGCTGTAGAGCCCAAATGCTACGCAAACTTTGATACGGAGCCAAAGCAGTGTTTGAAAAAGCTCAACATCCTTCTCTACAAGTATCCAGACAGTGTCTCCATCAGCTATAACCCGGCTGGTGCATTGGAGGAAGGGATGCCGTACGTGCAGCAGTGTGAGGTCCAGAGCATTGCCCCTGCTCAGAATCTCTCTGTGAACTGGTATAGATTTGGGGTGGTGATTCACAGAGAAACCTTCTCCACAGCCAGCAGTACAGGACCTGTGACTGTATACCCTAACCTCGTGATCACCCCCAACCGCACTGATGATGGAGCACAGTACAGCTGTGAGATAGAGATGAACCTGGGACCAGGAGGTCCGCAACCAAATCCTGTCATTAAGTCAAAGATCATCGTTACCACAGTGCTGTGTGAGTTCCACCGCCATGCATGTTGGGCAGATTGGT

Function

GO:

id name namespace
GO:0048598 embryonic morphogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008474 False 648 mRNA 0.59 4 2073783 2085025
TU61772 True 838 TUCP 0.57 3 2078703 2085006

Neighbor

gene id symbol gene type direction distance location
AMCG00008471 NA coding downstream 121947 1950660 ~ 1951836 (-)
AMCG00008469 s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 coding downstream 137364 1935304 ~ 1936419 (-)
AMCG00008470 dnmt1 coding downstream 160028 1896162 ~ 1913755 (-)
AMCG00008463 NA coding downstream 203575 1862614 ~ 1870208 (-)
AMCG00008467 NA coding downstream 262089 1809871 ~ 1811694 (-)
AMCG00008477 NA coding upstream 67586 2152611 ~ 2165650 (-)
AMCG00008482 NA coding upstream 84306 2169331 ~ 2172673 (-)
AMCG00008481 NA coding upstream 87811 2172836 ~ 2203443 (-)
AMCG00008480 NA coding upstream 123148 2208173 ~ 2212837 (-)
AMCG00008486 NA coding upstream 353684 2438709 ~ 2445212 (-)
G49394 NA non-coding downstream 2911 2069790 ~ 2070872 (-)
G49389 NA non-coding downstream 7488 2054515 ~ 2066295 (-)
G49346 NA non-coding downstream 334454 1738280 ~ 1739329 (-)
G49232 NA non-coding downstream 445418 1626287 ~ 1628365 (-)
G49211 NA non-coding downstream 749514 1321891 ~ 1324269 (-)
G49414 NA non-coding upstream 151502 2236527 ~ 2236861 (-)
G49419 NA non-coding upstream 274835 2359860 ~ 2360112 (-)
G49462 NA non-coding upstream 291980 2377005 ~ 2436757 (-)
G49547 NA non-coding upstream 738216 2823241 ~ 2823976 (-)
G49606 NA non-coding upstream 824637 2909662 ~ 2910628 (-)
G49375 NA other downstream 192821 1879621 ~ 1880962 (-)
AMCG00008462 NA other downstream 214292 1798845 ~ 1859491 (-)
AMCG00008466 NA other downstream 233684 1819774 ~ 1840099 (-)
AMCG00008452 NA other downstream 418304 1629854 ~ 1655479 (-)
AMCG00008428 NA other downstream 1133111 928937 ~ 940672 (-)
AMCG00008491 prkcsh,LOC102779661 other upstream 551890 2636915 ~ 2702422 (-)
G49605 NA other upstream 821650 2906675 ~ 2908665 (-)
AMCG00008554 NA other upstream 1345789 3430814 ~ 3871269 (-)
AMCG00008547 elof1,LOC103393660,LOC100703874,LOC106589640,LOC106935058 other upstream 1684659 3769684 ~ 3777354 (-)
AMCG00008602 NA other upstream 3502050 5587075 ~ 5610329 (-)

Expression


Co-expression Network