AMCG00008486


Basic Information

Item Value
gene id AMCG00008486
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 2438709 ~ 2445212 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008486
AGGTGAAGGCTCCTGATCTGGATTCTCGGCGGGTGAATGTGTGTCTGATCTCCTGGTGACCACGATGGCTCAGGTGCTGCACATGGACCCCAGCTTCCCGGGGAAGAGcaaccccacctcccccacaGCGCTGCACGGCAAGGAGCCGGAGCTGCCCTACTCAGTGGAGACGCCATATGGCTACCGCCTGGACCTGGACTTCCTGAAGTACGTCAACGACATCGAGAAGGGCAACACCATCAAGAAGGTGCCCATCCACCGCCGGCCGCGCTACAACTCCCTGCCCCGCGGCTATGGCTACACCGGCTCCTGGTGGACCTCCACCGAGTCGCTGTGCTCCAACGCCAGCATGGACAGCCGTCACTCGTCCTTCTCCTACTGCGCACCCGGCTACTATGGCTCCCACCGGCCCGAGAGCGGCCGCACCTCGCTGGGGCCCAGCGGCCTCGGCTTCAACGCTCGCGTGGAGCGCACCCTGCTGGACGCCCGCAAGAAGCTGGAGGAGGACCAGAAGGACGGCCGGCGGTTCTCGCAGCTGGGCAGCATGCACAGCAGCGTCACCGGCTCCACCAGCTCTCTGGCCGGTCAGGGCTACTCCCGCGGCCAGAACGGGGCCCAGGCCGGCGGAGGAGGAGGTCAGTTCACGCCCATGAGCTCAGGGCTGTCCACGCCAGTGTCGCCCACCCCGGCCCACCTGCAGCACGTGCGCGAGCAGATGGTGGTGGCACTGCGCAAGATCCGCGAGCTGGAGGAGCAGGTGAAGATGATACCCGTGCTGCAGGTCAAGATCTCGGTGCTGCAGGAGGAGAAGCGCCAGCTCAGTGTGCAGCTCAAGAGCCAGAAGTTTCTGGGCCACACCATGGGCTTCGGCAAGAGCCGGCCGCGTGGCGAGCTGTACATCGACATTCCAGAGGAGGCTGAGGCCAGGGCGGGGGCCGGAGGAGGTGCCGGTGGGGGAGCCCTGTCCCCCACCGCGGCGGAGAGCTGCCGCCAGGACTCGGGCTGCGAGATCGAGGACACAGTCATCGTGGGCGGGGCCCGGCTGCAGACGGGTGGGCGCAAGGAGGTGCGGTCAATCGGCACGGGGGCGGAGGGGGTGGAGGGCAGCGCGGAGAAGCCGGTGAGGCACATCGGGGTGGCGGTGCAGGAGCAGGACCTGGGGGCGCAAAGCGCCGAGGCCTGGAAGAGCAAGGTGGGCCTGTTGGAGAGCCAGCTGAGGAAGGCCCAGCAGGAGCTGCACTGCGCCCACCGGAAGCTGGTGCTGCAGGGAAAGCAGACAGCAGAGAAGGGGCAGGATGCCAAGCCCTCCATGGCAGACGCCGTCATGATGACCAGCGTGGGCTGGCAGGAGCTGCAGGCGGGGCGGCCCGGCGACGCCTCGGGCCTGCAGACGGTGGTGTCTTTCAACCAGCAGCCGCAGCGGCGGGAGCAGAGGACCGTGGGCATCCAGGTGTACACGCTGGAGCAGCCCACCGTGGTGCGCAGCTACCAGGACGCCTCGGGTGGCGCCAGGAAGGTCCAGGCTGAGTTCGTGCAGCAGCCCATGCCGGCTCACGCCAGCCTCTCCTGCACCCCCCTGCAGGAGCCCTGCGGGCGGCTGGGCGGCCCGGAGACGGCGCTGACGGTGGCGCACAGGAGAGAGGAGCCCCTGGAGACCAGCTTCCCCGTCCACCCCGAGGCCCGGCAGAGGAAGGCAGCCGGATCGGAGGGGGAGGCGGGGAGCGTGGAGGCAGCGGGGGCGGCTGTTCTAGAATCCTCCCCGGAGTTGCCCATAGCGATCTGCTCCAAGGAGGTCCGCGAGGTCCTTCAGAAGAGCGAGGTGTCCTCCTCGGTGCCGGTCTGCAGCCCGGCTGTGGTCCTGGAGACGGTCAGCGCCACGCAGCTGGTGTCCAGTCAGCTGGCCCCCCTGTGCCAGAGGTTAAAGGAAGCAGACGCTGCAGCACAGATGCACCCCGAGGCGGCCGCTGCGGCGGAGGAGGAGAGCACCTCACAGCCAGCCTCGCCGCAGTCCGGCCTGAAGTCCATCATGAAGAGTAAGGACAGCGAGGGCCGTGCGGACTCGCCTAACACCAAGAAGAACCTGCACTACGAGTCCACCTCCTCGTCGGAGAGCAGCTCTGAGAGCTCGGAGGACGGGGAGAGCTCAGAGAGCGAGTACCACGAGGCCAACGAACGCCTGCCCGAGGCCAGGGCCGCCGCCACTCAGTCCGCCCCCCCCGCGGTGCCCGGCCAGGGGTCTTCCGTGGCCCCCCCGGAGCCCCAACCCCAGCCAGAGGACATCACCCCGACACCCACCCCCACGCCCACCCCGCCACCAGCCACGGCCCCTGCTCCCACCGCCGAACAGGGCCTGAGCGAGGGTGCGGCCGGGGAGAGCGCTCCAGAGACGCAGTCCCAAGAGATCAGaCTGGAGCTGAGTGACAGCTTCATGTCGGCCTGCCGGACCCTACAGACAGCCCTGGGGGAGCCCAGCGCGTTCAGCCAGCAGGGGGTGAGGACGGCCTACACCACGGTGCTGCAGGAGTGGCTGCGCATCTCCTGCCACAAGGCGGCCGACCCGGAGGCGGTGCGGCAGTACATGGCGCTGTTCCGGTCCGTGTCGCCGCAGCTGCTGGAGTTCATCGTCAACATGGCGGACGGCAACGGCAACACGGCGCTGCACTACACCGTCTCGCACTCCAACTTCCCCGTCGTCAGGCTGCTGCTGGACACCGgtCTGTGTAACGCAGATAAGCAGAACAAGGCTGGCTACACCGCCATCATGCTGACGGCTCTGGCTGCCTTCCACTCAGACAGCGACCTGGACACGGACGACGACGGCTCCACGGCGCTGATGTGCGCCTGCGAACACGGACACGTGGACATCGTCAAGCAGCTGCTGGCCGTGCCCGGCTGCGACGCCACGCTGACGGACAATgaCGGCAGCACGGCCCTGTCCATCGCCCTGGAGGCCAACCAGAATGACATCGCCGTCCTCCTGTACGCCCATCTCAACTTCGCCAAGCCCCCGTCCCCCGTGACCCAGAAGGCTTTGCACCTGGGCACAGCGCCTCCCCCTGCAGAAGCGAAGCGTCCATCGCACTGTGACCCACGGTGGGGGGAGGACGCCTGCGCCAGCCCCCGAACTGTAGTGTCTGAAGGCGGCTCCCTCTCCTGCGACGAGCTGCGTCCCGGGAAGGAACAGCGTGCATCAATGGGGGAGGAAAAATAA

Function

GO: NA

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008486 True 3211 mRNA 0.68 12 2438709 2445212

Neighbor

gene id symbol gene type direction distance location
AMCG00008480 NA coding downstream 225872 2208173 ~ 2212837 (-)
AMCG00008481 NA coding downstream 235266 2172836 ~ 2203443 (-)
AMCG00008482 NA coding downstream 266036 2169331 ~ 2172673 (-)
AMCG00008477 NA coding downstream 273059 2152611 ~ 2165650 (-)
AMCG00008471 NA coding downstream 486873 1950660 ~ 1951836 (-)
AMCG00008488 NA coding upstream 44665 2489877 ~ 2535361 (-)
AMCG00008492 NA coding upstream 205480 2650692 ~ 2658093 (-)
AMCG00008490 NA coding upstream 223245 2668457 ~ 2673435 (-)
AMCG00008494 NA coding upstream 264330 2709542 ~ 2710591 (-)
AMCG00008496 NA coding upstream 277262 2722474 ~ 2727124 (-)
G49462 NA non-coding downstream 1952 2377005 ~ 2436757 (-)
G49419 NA non-coding downstream 78597 2359860 ~ 2360112 (-)
G49414 NA non-coding downstream 201848 2236527 ~ 2236861 (-)
G49393 NA non-coding downstream 363061 2068083 ~ 2075648 (-)
G49394 NA non-coding downstream 367837 2069790 ~ 2070872 (-)
G49547 NA non-coding upstream 378029 2823241 ~ 2823976 (-)
G49606 NA non-coding upstream 464450 2909662 ~ 2910628 (-)
G49614 NA non-coding upstream 529737 2974949 ~ 2975153 (-)
G49802 NA non-coding upstream 928332 3373544 ~ 3379324 (-)
G49806 NA non-coding upstream 944991 3390203 ~ 3392090 (-)
AMCG00008474 NA other downstream 353684 2073783 ~ 2085025 (-)
G49375 NA other downstream 557747 1879621 ~ 1880962 (-)
AMCG00008462 NA other downstream 579218 1798845 ~ 1859491 (-)
AMCG00008466 NA other downstream 598610 1819774 ~ 1840099 (-)
AMCG00008452 NA other downstream 783230 1629854 ~ 1655479 (-)
AMCG00008491 prkcsh,LOC102779661 other upstream 191703 2636915 ~ 2702422 (-)
G49605 NA other upstream 461463 2906675 ~ 2908665 (-)
AMCG00008554 NA other upstream 985602 3430814 ~ 3871269 (-)
AMCG00008547 elof1,LOC103393660,LOC100703874,LOC106589640,LOC106935058 other upstream 1324472 3769684 ~ 3777354 (-)
AMCG00008602 NA other upstream 3141863 5587075 ~ 5610329 (-)

Expression


Co-expression Network