AMCG00008496


Basic Information

Item Value
gene id AMCG00008496
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 2722474 ~ 2727124 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008496
ATGGACCGCCTGGGAAGGGAGCCCTTCGCCCCCGGGCAGCAGCCGGACTTCTCCCTGCTGACGGACCTGCTGTTCCCGGCCTACTGGGACCCCGGGAGCGGCGGCGAGTCGGCGGCCGCACTCCGAGCTAACGACGAGCAGAACAACAATCCCCGCGATCTGCGGCCTGTGCGGTCTCCGAGGAGGAGGCCGGACCCGGTGCCCCGGCGCGACCCCCAGGCGACCCCCGGCGGCGGCAGTGCGGACCCCGGCCGGGCGCGAGCGGCGGGCGCACGGGGGGCGCGCGCGCAGGGGGAGGCGATGCAAGTTGGCGGCGGCAGAATGAGCTCTGGTTTTGCGAGTCCTGCTGGCGGCGGCCCCTGTGCCACTGAGGAGCTGCCGGACCATGCGGTGCCACCGACCACCATCCTCTACCTTCTTCACGAGACCACGAAACTGGTGCCCCCTGTCAAGAGAGACGAGCCGGAGGCGTCGAGTATAGATGGGAATGCTGCACTTTCCCTGGATCGTAGCCCCTGCAGAAGCGagcctctccctcctccagcccctgctcctcctcttcctcgcttCTCAAGCCACCCTGGAGCCCTGGGACGAGGGGGCATCCGGGCCGAGCCGGGGAGGTACTCGGGGGCTTTTACGTTCCTGCCCAGCTCCGAGGGATGTGGCCCCTTGGATGTCATGAGCCTCATCAGCCTCCAGTGCAAGAAACTGATGCAGTCCGAGGCAGGGGAGGCGGAGCACGGCGGAAGGATGGCTGCCAAAGAGACGGTGTGCAGTGAGGCCCGACCCGCAGCGCAGGATCAAGCGTTGCTGTCCGGAGAGGGCGTGAGAGGCGAGTATTGTACCGTTCCCTGGAAAGGACCTGACGGAGCCGTGCGACCCAGAGCCGGGGTCAGAGAGGTGAGCCAGGTGAGAGACCGGGGGGGCAGAAGTGTCGATCGGTGTACGAGTCCAGCACCGGCAGGCACGGTGAGGAGAGGGGCCTGCCACCTGCCGTCCGGTAGCAAAACCCAAGCAAACTCGGGCGAGGAAATCCGTGCCGGCATCGAAAACAACATTTCAACAGGTGTGAAAGGGCTGCTTTCAGGGCCGAAAAGAGAGTTGTCCTCTACCAAAGAAACCTGGCAAGGGGGCACAGACCATTCTGCGTACCTGGCTGACCAGCAGAGCGATGGCGCTGACAAAGGTGAAACTCGGCGGCCTAACAGTGTACCTTCCCCGGTGGAGGCCGTGGGTGCGGGTTGCTGCGGTGCGGCTTTATGGCCAGACGTGAAAACGGACTTCAGCTCAAACTCGCTCGAAATCCCCGCGGGCAAAGCTGCGGCCGGCCCGGGCTGTGTGAACAGAGCCCCGCCCGGGTGCGGCACGGCGGAACTAATCCACACCAGCCACAAGCTGGTGCCGGAGCAGGTCGGGCCGGGCCCCTCCTGGGCCTGCGTGGGGGCCGAGGGCGAGAGGATGCAGATCGGCCCTGCCCCCGGCTGCCGCACCCGGACGCCGCGCAAACAGCGGAACCCCACGAGGAGCGCCGACCGGCACGACCCGGCCTTCCGAGGGGTGACCATCCACATGCAGACGCAGCTCTGCGGCGACGTGGCGGACCAGTGCCAGCTGCTCATCACCTCGCAGTACAGGTACCGGTGCCGTCCCCTCGGCCCCCCTGCGCCTTCTATAAGGGCCTCAAGACAGTTAAGAGCAGTGAAGAATGAGATAAGTCGCCGACCCAGAGTCAGCAAGACGCTCGCCAGCGCCAGCAAGACCAGCAGCTCAGAGGAGGAGAGCGACCCGGCCTTCCCGCTGAAGAATAAAATCTGTGCCTCCTGCAGCACGAAGAAAACCCCGCTGTGGAGGGATGCGGAAGACGGGACGCCGCTGTGCAACGCGTGTGGAATACGGTATAAAAAGTACCGCATCCGGTGTTTCCGCTGCTGGCACATCCCCAAGAAAGAGGGCAACTCCAACTCCACGTGTGTGAAGTGTGGAGACGTCCTGCGAGTGGCAGCGTCCCACCGGAAAAACGTGAGCTGGTAG

Function

GO: NA

KEGG:

id description
K21630 ZGLP1; GATA-type zinc finger protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008496 True 2034 mRNA 0.65 5 2722474 2727124

Neighbor

gene id symbol gene type direction distance location
AMCG00008494 NA coding downstream 11883 2709542 ~ 2710591 (-)
AMCG00008490 NA coding downstream 49039 2668457 ~ 2673435 (-)
AMCG00008492 NA coding downstream 64381 2650692 ~ 2658093 (-)
AMCG00008488 NA coding downstream 187113 2489877 ~ 2535361 (-)
AMCG00008486 NA coding downstream 277262 2438709 ~ 2445212 (-)
AMCG00008495 fdx1l coding upstream 4763 2731887 ~ 2734504 (-)
AMCG00008503 NA coding upstream 84237 2811361 ~ 2814023 (-)
AMCG00008501 NA coding upstream 97337 2824461 ~ 2832172 (-)
AMCG00008500 NA coding upstream 105595 2832719 ~ 2835316 (-)
AMCG00008504 ap1m2 coding upstream 111971 2839095 ~ 2845891 (-)
G49462 NA non-coding downstream 285717 2377005 ~ 2436757 (-)
G49419 NA non-coding downstream 362362 2359860 ~ 2360112 (-)
G49414 NA non-coding downstream 485613 2236527 ~ 2236861 (-)
G49393 NA non-coding downstream 646826 2068083 ~ 2075648 (-)
G49547 NA non-coding upstream 96117 2823241 ~ 2823976 (-)
G49606 NA non-coding upstream 182538 2909662 ~ 2910628 (-)
G49614 NA non-coding upstream 247825 2974949 ~ 2975153 (-)
G49802 NA non-coding upstream 646420 3373544 ~ 3379324 (-)
G49806 NA non-coding upstream 663079 3390203 ~ 3392090 (-)
AMCG00008491 prkcsh,LOC102779661 other downstream 20052 2636915 ~ 2702422 (-)
AMCG00008474 NA other downstream 637449 2073783 ~ 2085025 (-)
G49375 NA other downstream 841512 1879621 ~ 1880962 (-)
AMCG00008462 NA other downstream 862983 1798845 ~ 1859491 (-)
G49605 NA other upstream 179551 2906675 ~ 2908665 (-)
AMCG00008554 NA other upstream 703690 3430814 ~ 3871269 (-)
AMCG00008547 elof1,LOC103393660,LOC100703874,LOC106589640,LOC106935058 other upstream 1042560 3769684 ~ 3777354 (-)
AMCG00008602 NA other upstream 2859951 5587075 ~ 5610329 (-)
AMCG00008609 NA other upstream 2928565 5655689 ~ 5786328 (-)

Expression


Co-expression Network