AMCG00008497


Basic Information

Item Value
gene id AMCG00008497
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 2815396 ~ 2823096 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008497
TTTCACggtcaaacaaaataaaaacaccgaAAACAAGGTCCCATTATTGATTCGTTTAATTGTTGATGACTTGGGTGACTCATTAAATAACGTTAGTTTTATTTCTGGGATCACTATGTATAGTCTCCGAACTAATGTGTTAAAGGTAACAAAATAACACAGTTTTGTGTAAACATTTACCAAATTATAACaatgatgtgtatttttttacacaatggTTTTCCCCCACACAAAAGACACATTGCCgtgttcattttaacacaaaattgtgttgtccttgaacaatttaacacattagttctaagagtgtataattgcatattttttaattattatgagaGTTGCCTCCCTTGATTAAAATATCtcgatttaatttaattagttttcagtttgtttttggaaatgccTTGTTTTAACATGACGTATTGAACCCACAACAAGGAAGACGCAATGTATACAACTGGCTCAACAAGTGAATCgtttaatttagtttctacTGGCCTGGAAACCAACGCCAGGTGGATGGATTAATTGCAACCCACTGTTAATTGGCAAGTTCAATGTGTTGGTCGTTTAGCTGGAGCAAGCGCGGAGATCAAGGTGATGTCATCAGTGAAATCATGCAGAAGTATTAAAATATTCCTATTATGTagtaaaacattataaacaaacgAATATGATCTCCTTTCTCCATGTATTCAAAAGTTAGACTTTTTAACAATTTGCAGTAGTTTAGTATACTATTTTGTTCAGTTTCCTATACGCATTGTGTCCCCAGTTTACTTTTGCCTGGAATGCAGATACGGTATCTCCTGACGCCACAAGGTAGCCTGCCTGCCGGTGTCTCTAGGGGCGGGGAGGAGACGGAGGAGACGGAGGTTGGCACTTCATTCCGCCAGTAGGCGACCATCACACCACGACCTGCCAGAAACGCGTGGAGTTCAAGAGACAGTCGCTCCGGACCAATGGACCCACAATAAGTGCCAGACAGCGGAACGGGCTCAAGGGCTGTAAGAAAGATAAAGAAGGAACAAGTCAGCGAAGCTCAAATCAGGCCGAGACAACAACCCCATGGAGAAGAGTTAGAGCCGCTGAAGCGGGACAGCGTGCGTGTGGATCCGACTCCAGCCCAGGTGTGCGGGCCGGGCGCTGCAGtATGATCCCTGTGACCGAGTTCAGGCAGTTCACGACCGATCAGAACCCCCGGCTGCGCGTGCTGAAGCCGTGGTGGGATGTCTTCACCGAATATATCTGCACCGCCATGCTGATGATCGGCGTCTTTGGCTGCACGCTACAGctgacTCAAGACAAGATCGCATGTCTCCCAATCCACCAGTCTGACCCCTACCTGAAAAACACCACCTGCAATCACATCACAGGTCAACACGACCACTCCGGCGCGCCGCACATGAGCGCAGACTCGGGGGTCCAGGAGATGTTCGGCCGGAAGAACAACCTGGACGTCCACCAGTACATCTACGTCAACTACCTCTGCTACGAGAAGGCCCTGCACTGGTATGCCAAGTACTTCCCCTACCTGGTGGTCATCAACTCCATCATCTTCATGATCTGCAGCAGCTTCTGGTTCAAGTTCCCCGGCACCTCCTCCAAGATCGAGCTCTTCATCTCCATCCTGGGCAAGTGCTTCGACTCCCCGTGGACCACGCGGGCGCTGAGCGAGGTGTCCGAGGAGCGCAAGGAGGAGAAGATGGTGGTGTGGCGGAGGGATGTCTTCTCCAAGACCAACTCGCTCACCGACGGGCTCGTCCAGGAGGAGGAGACAGTGGGCCTGCTGCGCTCAGCCTCGACCAAATCCAAGGCCGAGAAGAAGCTGGCCGAACAGCCGCCGGACACCTCCGCGCTGGACAAGAAGGAAGGGGAGCAGGCAAAGGCGCTATTCGAGAAGGTCAAGAAGTTCCGCAGCCACGTGGAGGAGGCTGACATCCTGTATTTCATGTACGTCCTGCAGACGTGCCTCAAGGTCTTCATGGTCATCCTGATCATCATCTATAGCGCTGTGCTGGTGTCGAACATCAAACTGGAGGTGCCCTGCTCTGTGGACGCACAATTCACCGGCTTTGACACCTTCTGCTGCAGCCACACCAAGGCCCACCTCTTCGCCAAGCTGGCCTACTGTTACATCTGCCTGTTGAGCGTCTATGGCTTGGTGTGCTTCTACACCCTGTACTGGCTCGTCCACCGGCCCCTGAAGGAGTACTCCTACGACACCATGCGCCTGGAGACTGGCATCACCGATATCCCCGACTTGAAGAACGACTTCGCCTTCCTGCTGCACCTGAGCGACCAGTACGACGCCCTGTATGCTAAGCGCTTCGCCGTCTTCCTGTCGGAGGTGAGCGAGGGCCGGCTGCGGCAGATGAACATGAACAACGAGTGGACGGCAGAGAAGCTGCGCCAGCGGCTGAGCAGGAATGCGCAAGAGCGGCTGGAGCTGCACCTGCTGATGCTGTCCGGGCTGCCCGACACCGTCTTTGAGATGGCCGAGGTGGAGGTGCTCAAGCTGGAGCTCCTGACCGAGGTCACCATCCCCGGCAGTGTTGCCCAGATGAGCTGCCTACAGGAGCTGTGCCTCGTCCACTGCCCTGCCAAGCTGCAGTTGGCCGCCCTGCACCACCTGCGCTCCAGCCTCAGGGTCCTGCGGCTCACCTTCGACGGGCCGGAGCAGGTGCCCATGTGGATGTACACTCTGCACAGCCTGGAGGAACTGCACCTGACGGGGTCCCTGAGCCATGAGCTCCAGCGCAGCCCCTCCCTGGACACCCTGCGCGAGCTGCGGAGCCTCAAGCTGCTGGTGCTGCGCTGCCGGCTGCCCAAGGTCCCGCACAGTGTGACGGACGTCGGCGCGCACCTGCAGAAGCTGCGCATCTACAACGAGGGCGGCAAGCTGCACTCCTTCAGCAGCCTGAAGAAGATGTCTGCCCTGACGTCACTGGAGCTGGTGGGCTGCGAGCTGGAGCGCATCCCCCACGCTGTCTTCAGTCTGGCCAACCTGCAGGCGCTAGACCTGAAAGACAACCGGCTCACCTCAGCCGAGGAGGTCCTCAGCCTGCAGCACTGCCGGCGCCTCACCACGCTCAAGCTGTGGCACAACGGCATCACCTGCGTGCCCGACCACATCCGCAAGCTGCGCTCCTTGGAGAGTCTGCACCTGTGCTGGAACAAGATCAGCAGCCTGCCCGCCGGCCTGTTCTACTGCGTCAAGCTGCGCCACCTGGACCTCTCCCACaacctcctggccagcctgccgcCCGAGGTGCGCATCCTCCAGAACCTGCAGTTCCTCTCGGCGGCCCACAATGCCCTGGCCTCCCTGCCCGATGAGCTCTTCTCCTGCAGGCGGCTGCAGACCCTGCTGCTTGGCCACAACAGTCTGTCCTCCCTCTCGCCCAAGGTGGCCCAGCTGACCCAGTTGGTGCAGCTGGAGCTGAAGGACAACGGGCTGGAGGCGCTGCCGCCCGAGATCGGGGAGTGCCGGCTGCTGAGGCGCAGCGGCCTCGCAGTGGAGGACACCCTGTTCGACCTCCTGCCCGCCGAGGTCAGAGCGCAGATGAAGGACAGCTGAGCCGCACCGAGGGAAGTCGGTGGGAGGGTGCGGTTATGTGCGGTGGGGCAGAGTCACGAGGGTGAGGTGCTGTTgatgttggttttctttttacagaCTTGTGCACAAGACCCTGATTTGAATCGCTCTCCCCCAGACAGCAGCCAATCAAGAGAGATGGCTGAAATAACGATCTGTAATTGGGGAGTAGCTGCACCGAGCCATTGCTCCTCCAGTTGGCCCATTCTCTCGGTGTGGGTCCCCCCTGCGCTGGCCAGATCAAAAGCTGGGGAGTCCCAGAAGAGGTGTGGATTGAAATAAAGGACAATAACAGTTAAACTAAAAACACTAGAGAAACACCCAAAAGGAGAAGAACATGTTTTAAAcgcatacattttatttattttttataggaCACTTATATACTGATGACCTGCTATTTCTGTGCCTTGAAGAGAAGTGGGTTAAACTGACagtgtttttctcattttatttcctgtttagATGTGATCTAGTGGATGAATTGTGCTAACATTTAGTGAGGCATGGTgagaggggggacagagagggatCACTCTTCTTCAGCACAGCCCGAGTTGGGCTGCCTGCATCTGGGTTGGTTGAGCGCTTATTGAGTTGCACACAGTGTTGATGCAGGGATGCTATAGTCTGTGCCACCAGTGACATCATACCTCTCCAGGAATCAGAAGCCCTGGTATGCAAACACAGCCACGCCGCCAGGGTGGATGAGCTGCGAGTCATCCTGCCTAACTGGTTTGATCAAGGGCTCAGTCCTACTCCCAGCTCAGATCCACACCGCTCTCCTCATCGGTAACCAAGACCAAAGCGGCTCAACAACTCCGGTCAAGCAGCATGTAGGCCAGGGGTGTCAGACCCCAGTCcttggggggccgcagtgtctgttTTTCCTTCCCCCAATAGGAGCTCCCAATTTCATAATGTCGattctttaaataaagattttttttgtagccAATACCTTACGATTTGCTTGACTcacactgaacccacagaaccGTCTGGAGAGAAGAGTTAATTGACCTTTCACAAAACTGTAGTGTAGTGGCGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008497 True 4653 mRNA 0.54 3 2815396 2823096

Neighbor

gene id symbol gene type direction distance location
AMCG00008498 keap1 coding upstream 4097 2798540 ~ 2811299 (+)
AMCG00008499 NA coding upstream 21516 2787868 ~ 2793880 (+)
AMCG00008493 NA coding upstream 94735 2715820 ~ 2720661 (+)
AMCG00008489 elavl3,LOC102780136 coding upstream 185197 2616463 ~ 2630199 (+)
AMCG00008487 NA coding upstream 298887 2515229 ~ 2516509 (+)
AMCG00008505 NA coding downstream 81463 2904559 ~ 2906941 (+)
AMCG00008509 NA coding downstream 171845 2994941 ~ 3003560 (+)
AMCG00008510 prdx2 coding downstream 193360 3016456 ~ 3019921 (+)
AMCG00008514 NA coding downstream 197499 3020595 ~ 3021066 (+)
AMCG00008516 LOC106601330 coding downstream 264084 3087180 ~ 3102783 (+)
G49541 NA non-coding upstream 2503 2812174 ~ 2812893 (+)
G49431 NA non-coding upstream 350729 2445185 ~ 2464667 (+)
G49341 NA non-coding upstream 601903 2212429 ~ 2213493 (+)
G49321 NA non-coding upstream 606919 2163319 ~ 2208477 (+)
G49294 NA non-coding upstream 904977 1908823 ~ 1910419 (+)
G49582 NA non-coding downstream 62735 2885831 ~ 2886138 (+)
G49598 NA non-coding downstream 86566 2909662 ~ 2910628 (+)
G49599 NA non-coding downstream 87598 2910694 ~ 2910939 (+)
G49636 LOC106607037,LOC105028343,LOC103364966,LOC106607038 non-coding downstream 204882 3027978 ~ 3042595 (+)
G49738 NA non-coding downstream 533603 3356699 ~ 3359529 (+)
G49523 NA other upstream 45352 2765879 ~ 2770044 (+)
G49340 cdc37 other upstream 603882 2209483 ~ 2211514 (+)
AMCG00008476 NA other upstream 672002 2127715 ~ 2143394 (+)
AMCG00008475 NA other upstream 707604 2088480 ~ 2107792 (+)
AMCG00008473 NA other upstream 739747 2062556 ~ 2075649 (+)
G49583 smarca4,LOC102779508 other downstream 63670 2886766 ~ 2888896 (+)
AMCG00008526 NA other downstream 606801 3429897 ~ 3885604 (+)
G49980 NA other downstream 1332992 4156088 ~ 4160062 (+)
G49982 NA other downstream 1338962 4162058 ~ 4165483 (+)
AMCG00008580 pnpla6,LOC106564686 other downstream 1738895 4561991 ~ 4572874 (+)

Expression


Co-expression Network