AMCG00008498 (keap1)


Basic Information

Item Value
gene id AMCG00008498
gene name keap1
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 2798540 ~ 2811299 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008498
TTATTCTGGCACTGCGATAAGGTTAGTGCAATGCTTAGTCATGGTGAGTTACAGCTTTCTCTCGCCAGCCTTTATTTCTCGGCACACAGGCAGCGATGGAGGAGACGCACACAATCTGCCATAGAGCCATTCTGTCTGAGAGCGGTCAGCGGTGTCACGGCACTGCCAGAGGGAGCTCCCGAGTGACCAACTGACCGGCCAGCAGGCAAGGAGAAGGACAAAAACAGCTGTCTGGAGACGGCCGGACTCTCGGAGCGATTTTGTTAACGGTGCCAAGCTGCTGTGCGCCCTCTGCAAGGCATCCCCCCACCCACTTCATATTAAGCGTGTGGAATTTAGCTCCCCTCCTATATCTacctcaaataaaaaacaaccaccacctGCCTTCCACAGACGTGCAGGAAGACAGGAAAAGGAAGGAGTCCGTCTTAAACAGAATACAACCCCATCGCTCCTCTGACTGCTGCTACAGTAGCCTCTCAAATCACAACGCAACACTTTTAGTTTGGGATCGTGCTTTCCAAACACTTTCCGGGCCTTCTGCCTGTCACCCAGTCTCTcccctgatttatttttttggttccaAACTTCCCGCATTGCCCGGGAAAGACAAAATGGCCAGTTACACATCTAAATAGCTCTCCATTGTgctcccctccccacccccaacatGCTTTGAATCGCATGTTGTTTCCCTGTCAGCTCCTCAGCTGTCGCATTGGCTGAAAAAAGGGAATATCACTGATTTCCACCCCTCGTCAATGGAAAAAATGGCGTCGCGGCCACAGATCCCGAACAAGAGCTGTCCATACATAGGGGCCTTCAGTCATGTCCCTTTTATAATATGTCCCTGATCCCAACTCCAGTTCCCCCGCCGGTTGCAGGCCtacttttacattacattatttgtcatttagcaggtgctcttatccagggctacTTCACTTCTCTTCTTTCCATGCGATACCGAACAAATTAGTGTGAAAGCATATAAATGCTggtgaataaatgaatgagtgACTATATGAATAACGCCCAACTCATTGCTTCGGGGGAGACCAGAACGGTGAAAACCTCAGAACAAAGGAATGCGATCCGACGTCCCTCCTTAGCTGAACACAGTTTTTAGTAGAAGatcaaatcacaaaaacaaattgttctATACGAATAAAATCCCAAACCCAAACCTGCCCCAGATTGTCCCCAGAATCAAAGTAGCCtccaccctcctcctctcccgCCGTGGCGAGCGATGTCTCCGCGGTCGTAGCGCCGGCCACAGCGATGTACGCGGTGGCCACGGAGTGCAAGGCCGAGGTGACGCCCTCGACGCGGAACGGCCACCGCGTCTTCAGCTACACCCTGGAGAGCCACACGGCGCAGGCCTTCGGCATCATGAACGAGCTGCGGCTGGAGCGGCAGCTGTGCGACGTCACCCTGCGGGTCAAGTACAGCGATCTAGAGGCCGTGGAGTTCGTAGCCCACAAGATCGTGTTGGCCTCCTCCTCGCCCGTCTTCCGTGCCATGTTCACCAACGGCCTGAAGGAGTGCGGCATGGAGGTGGTGCCCATCGAGGGGATCCATCCCCGGGTGATGGAGCGGCTGATCGAGTTCTCCTACACGGCCAGCATCTCGGTGGGGGAGAAGTGCGTCATCCACGTGATGAACGGCGCCGTCATGTACCAGATCGACAGCGTGGTCAAGGCCTGCTGCGACTTCCTGGTGCAGCAGCTGGACCCCAGCAATGCCATCGGCATCGCCAGCTTCGCCGAGCAGATCGGCTGCACCGAGCTGCACCAGAAGGCCCGGGAGTACATCTACATGAACTTCAGCCAGgTGGCGACGCAGGAGGAGTTCTTCAACCTATCACACTGCCAGCTCGTGACGCTGATCAGCCGCGACGAGCTGAACGTCCGCTGCGAGTCCGAGGTGTTCCACGCCTGCATCGCCTGGGTCAAGTACGACAGCGAGAACCGCCGTCCCTACATCCAGGCGCTGCTGCGGGCCGTGCGCTGCCACTCTCTGACGCCCCACTtcctgcagctgcagctccagAAGTGCGAGCTGCTCAAGGGCGACTCCCAGTGCAAGGACTACCTGGCGCAGATCTTCCAGGACCTGACACTGCACAAGCCCACCACCGTGCTGTCCTGCCGCACGCCCAAGGTGCCCCAGCTCATCTACACCGCAGGGGGCTACTACCGCCAGTCCCTCAGCTACCTGGAGGCCTACAACCCCTGCACGGGCGCCTGGCTGCGGTTGGCCGACCTGCACATGCCCCGCAGTGGCCTGGCGGGCTGCGTCATCAGCGGGCTGTTCTACGCGGTGGGCGGGCGCAACAACGCCCCCGACGGCAACATGGACTCCAGCGCCCTGGACTGCTACAACCCCATGAACAACCACTGGTGCCCCTGCGCGCCCATGAGCGTGCCACGCAACCGCATCGGCGTGGGCGTCATCGACGGCATGATCTACGCAGATTCCTGGCAGCTGGTGGCACCCATGCTGACTCGGCGGATCGGGGTGGGTGTGGCCGTGATCAACCGGCTGCTGTACGCCGTGGGGGGCTTCGACGGCACCAACCGGCTCAACTCCTCCGAGTGCTACAACCCCGAGAAGGACGAGTGGAGGACCGTGGCGCCCATGAACACGGTGCGCAGCGGAGCTGGCATGTGCGCCCTGGGCAACGCCATCTACGCCATGGGCGGGTACGACGGCACCAACCAGCTCAACACGGTGGAGTGCTACGACATCGAGACGGACTGCTGGGTCTTCGTGGCACCCATGAGGCACCGTCGGAGTGCGCTGGGCGTCACGGCGCACCACGGCAAGATCTACGTGCTGGGGGGTTACGACGGGAACATGTTCCTGGACAGCGTGGAGTGCTACGACCCGGCGACCGGCTGCTGGGACGAGGTGACCAGGATGACCTCGGGCCGCAGCGGGGTGGGCGTGGCCGTCACAATGGAGCCCTGTCCCAAGCAGCTCGCCCAGAGCCAGGGACAGTGCCGGGGTCAGAGCCAGGGACAGTGCCAGGGACAGTGCCAGGGGCAGAGCCAGGGACAGGGACAGTAGAGCACCCCCGCCCATGGGGCAAGAGAGAGCGGGCGTGGGAGAGGGGAGAAAGCCAGCTGCCCCGTTGGAAGCCCGTCCAACACATGAGGTCCTCAAGAACCCCCCCCAGAGTCCCGCAGGGTCTTTTTAAAAACACCGTTGGCCATTTTCCACAAACTGTAAACGCGGCCCTGACTGGAAAAGGGAAGACGGATCGATAAACGAACAAACGACTGCGCGATTGGTTCGGGGGGTGGACGCCTGCGGGGGTCCTTCACAGGGGTTGACGGGAGGCCCAATCCTGTATCCAAAGTGCCACAGTCTCGTCCGACCAGCTGATCAGTACGCCAGTTGAACGAGACTCCCCCGTCGACAGCAACCATCTCCGAGAACGGGAGTGTGACCTGAACCGCCCAGACGAAGCCCGGCGGCACCGCAAAATATACCCCCCCCTCCACGCCCAAAACTGTCTCGATATGAGTTCATTATAGAAGACCCGGTCACTGCTCACACATTTTCTATCAGAAGTTTAAGctacaagaaaagaaaatctttaCAAGGATTCTTTTTGTACCTTGATATTCCGCCACCTTGTACAGAATTCTGAAGTttcatgttttctgttcttgtcgtagtttagtttttttctcttcttctcttcctcGCACTTTGTAAAGGATTGGGTTTGGATATTCAGTGTTTGTGCCGATCGATCGCGCACCGGTTTAATTTAAGGACTTTCGACTTCTCCTCCGAGCGAATGGACTGCGGAGACTGTGAGGGGTCGCCTCGGTTGCTGagattaacatttaaaatagctttgtaaattgtaaagcaaaatgatgatgatgattgcattgtacattaaaatatttgtttgtcta

Function

symbol description
keap1 Predicted to enable disordered domain specific binding activity and identical protein binding activity. Involved in cellular protein metabolic process; cellular response to oxidative stress; and regulation of autophagy. Located in several cellular components, including centriolar satellite; inclusion body; and midbody. Part of Cul3-RING ubiquitin ligase complex. Implicated in gallbladder cancer. Biomarker of amyotrophic lateral sclerosis; idiopathic interstitial pneumonia; and pulmonary emphysema.

NR:

description
PREDICTED: kelch-like ECH-associated protein 1

GO:

id name namespace
GO:0042221 response to chemical biological_process

KEGG:

id description
K10456 KLHL19, KEAP1, INRF2; kelch-like protein 19

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008498 True 3938 mRNA 0.57 7 2798540 2811299

Neighbor

gene id symbol gene type direction distance location
AMCG00008499 NA coding upstream 4660 2787868 ~ 2793880 (+)
AMCG00008493 NA coding upstream 77879 2715820 ~ 2720661 (+)
AMCG00008489 elavl3,LOC102780136 coding upstream 168341 2616463 ~ 2630199 (+)
AMCG00008487 NA coding upstream 282031 2515229 ~ 2516509 (+)
AMCG00008483 NA coding upstream 367759 2424395 ~ 2430781 (+)
AMCG00008497 NA coding downstream 4097 2815396 ~ 2823096 (+)
AMCG00008505 NA coding downstream 93260 2904559 ~ 2906941 (+)
AMCG00008509 NA coding downstream 183642 2994941 ~ 3003560 (+)
AMCG00008510 prdx2 coding downstream 205157 3016456 ~ 3019921 (+)
AMCG00008514 NA coding downstream 209296 3020595 ~ 3021066 (+)
G49431 NA non-coding upstream 333873 2445185 ~ 2464667 (+)
G49341 NA non-coding upstream 585047 2212429 ~ 2213493 (+)
G49321 NA non-coding upstream 590063 2163319 ~ 2208477 (+)
G49294 NA non-coding upstream 888121 1908823 ~ 1910419 (+)
G49271 NA non-coding upstream 959536 1838186 ~ 1839004 (+)
G49541 NA non-coding downstream 875 2812174 ~ 2812893 (+)
G49582 NA non-coding downstream 74532 2885831 ~ 2886138 (+)
G49598 NA non-coding downstream 98363 2909662 ~ 2910628 (+)
G49599 NA non-coding downstream 99395 2910694 ~ 2910939 (+)
G49636 LOC106607037,LOC105028343,LOC103364966,LOC106607038 non-coding downstream 216679 3027978 ~ 3042595 (+)
G49523 NA other upstream 28496 2765879 ~ 2770044 (+)
G49340 cdc37 other upstream 587026 2209483 ~ 2211514 (+)
AMCG00008476 NA other upstream 655146 2127715 ~ 2143394 (+)
AMCG00008475 NA other upstream 690748 2088480 ~ 2107792 (+)
AMCG00008473 NA other upstream 722891 2062556 ~ 2075649 (+)
G49583 smarca4,LOC102779508 other downstream 75467 2886766 ~ 2888896 (+)
AMCG00008526 NA other downstream 618598 3429897 ~ 3885604 (+)
G49980 NA other downstream 1344789 4156088 ~ 4160062 (+)
G49982 NA other downstream 1350759 4162058 ~ 4165483 (+)
AMCG00008580 pnpla6,LOC106564686 other downstream 1750692 4561991 ~ 4572874 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_032495 keap1b coding NC_007117.7 CM002890.2 131998 ~ 138603 (-)
grasscarp (Ctenopharyngodon idella) CI01000130_00780796_00795977 KEAP1B, KEAP1 coding CI01000130 null 780494 ~ 796115 (-)