AMCG00008505


Basic Information

Item Value
gene id AMCG00008505
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 2904559 ~ 2906941 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008505
ATGAGCCCAGGTTGCGTCTCGGCCAAACTGTGGCGGTTTCTCCTCGCCGGGCTGCTGGTCGCGCTCGCCCTCACcgcagtgctgctgctgttggcaGGACAGTCGCTCCAGTATATGAGGGATAGAAGCATGACACCGGTGGGGAATCCTCATAGTGCCACCCCCAGCAGAGCCCAGGACATGTCACCTGGGGGGCtccacagagagggagaggggcagtCCGGGCTGGGCTTCACTTGGGACCCCCTCCCCTCCCGCCCTCCCCGGCAGAGCCGCCGACGTCACCACCACATCGTCTTCCTGAAGACGCACAAGACCGGGGGCAGCACGGTGCAGAACCTGTTGTTCCGCCTGGCAGAGAAGGAGGGCCTCACTTTCGCCTTCCCCTACTTCACCTACCAGTTCGGCTACCCACAGAGGTTCCGGGAGGAGTTCGTGGACGAGCTGCCGCCGGGCGCCTCGCAGTTCGACATCCTGTGCAGCCACATGCGGCTGGACCTGCCCCAGCTGCGGCGCATGATGCCCGCCGACAGCATCTACCTCACCATCCTGCGAGACCCGGTCAGCACCTTCGAGTCTGTCTTCAGCTACTACGCCTCCATGGTGCCAGCCTTCACGCTGGTGCAGAACCGGGCGAGCGATTCCCCCGGCGGTCCCGACCAGCGACAGCTCCTCGCAGCCTTCCTGGCGTCGCCCGAGTCCTACTACGACCCCGCAGACCCGAGCAACGGCCTGGCCCGGAACCCCATGACCTTCGACCTGGGTCTCGGCCCCCGCGAGTGGAACGCCAGCTGGGCGGGGGAGCTGGCAAAGCTGGCAGAGGCGTTCCACCTGGTAATGATCGCCAAGCACTTCGATGAGTCGCTGGTGCTCctcaaggagctgctgcagctggACTACCAGGACCTGGTGTATGTGGAGCTCAACGCCCGGCCCGGGCCCGACCGAGCCCAGCCCGACGAAGAGCTGCGCGCCCGGGTCCGGTCCTGGAATGCCCTGGATGTGCTCCTCTACGAGCACTTCTCGCGGCTCTTCTGGGAGAAGGCGCGGCGCTACGGGCTGCGGCGGCTGGCAGAGGGCGTACGGGAGCTGAGGGCGCTGGCGAGGCGGACGCGGCGGCGCTGTCTGCAAAGAGAGGGCGTCCCCCCTGGGGAGCTGGAGGACCTGCTGCGGCCCTGGCAGCCCAACTCCGCCACCATCTTGGGCTACGACCTGCGGGGCAACCTGAGTGCGCAGGAGCAGGGCTCGTGTCTGCGGCTGGTGCTGCCCGAGCTGCAGTACCACTCCTACCTGTACTTCCAGCAGTACGGCCGGGACCTGAGGTTGGTGCCGGCCGGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008505 True 1341 mRNA 0.67 3 2904559 2906941

Neighbor

gene id symbol gene type direction distance location
AMCG00008497 NA coding upstream 81463 2815396 ~ 2823096 (+)
AMCG00008498 keap1 coding upstream 93260 2798540 ~ 2811299 (+)
AMCG00008499 NA coding upstream 110679 2787868 ~ 2793880 (+)
AMCG00008493 NA coding upstream 183898 2715820 ~ 2720661 (+)
AMCG00008489 elavl3,LOC102780136 coding upstream 274360 2616463 ~ 2630199 (+)
AMCG00008509 NA coding downstream 88000 2994941 ~ 3003560 (+)
AMCG00008510 prdx2 coding downstream 109515 3016456 ~ 3019921 (+)
AMCG00008514 NA coding downstream 113654 3020595 ~ 3021066 (+)
AMCG00008516 LOC106601330 coding downstream 180239 3087180 ~ 3102783 (+)
AMCG00008515 NA coding downstream 212168 3119109 ~ 3124136 (+)
G49582 NA non-coding upstream 18421 2885831 ~ 2886138 (+)
G49541 NA non-coding upstream 91666 2812174 ~ 2812893 (+)
G49431 NA non-coding upstream 439892 2445185 ~ 2464667 (+)
G49341 NA non-coding upstream 691066 2212429 ~ 2213493 (+)
G49321 NA non-coding upstream 696082 2163319 ~ 2208477 (+)
G49598 NA non-coding downstream 2721 2909662 ~ 2910628 (+)
G49599 NA non-coding downstream 3753 2910694 ~ 2910939 (+)
G49636 LOC106607037,LOC105028343,LOC103364966,LOC106607038 non-coding downstream 121037 3027978 ~ 3042595 (+)
G49738 NA non-coding downstream 449758 3356699 ~ 3359529 (+)
G49754 NA non-coding downstream 507240 3414181 ~ 3443897 (+)
G49583 smarca4,LOC102779508 other upstream 15663 2886766 ~ 2888896 (+)
G49523 NA other upstream 134515 2765879 ~ 2770044 (+)
G49340 cdc37 other upstream 693045 2209483 ~ 2211514 (+)
AMCG00008476 NA other upstream 761165 2127715 ~ 2143394 (+)
AMCG00008475 NA other upstream 796767 2088480 ~ 2107792 (+)
AMCG00008526 NA other downstream 522956 3429897 ~ 3885604 (+)
G49980 NA other downstream 1249147 4156088 ~ 4160062 (+)
G49982 NA other downstream 1255117 4162058 ~ 4165483 (+)
AMCG00008580 pnpla6,LOC106564686 other downstream 1655050 4561991 ~ 4572874 (+)
G50215 NA other downstream 2689082 5596023 ~ 5596799 (+)

Expression


Co-expression Network