AMCG00008514


Basic Information

Item Value
gene id AMCG00008514
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 3020595 ~ 3021066 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008514
atggaggtGGGGGACTCTCTAAACACCCGTGGGGCACCACACCCTCACCGCTGGAGCCCTGAGCCCGCCTGCGTTGGCTTCagcacatttctatttttgacCCGCCGGCTGTCGGTGTGCTGGCAGTGCCAAAGCCCTGGTTTCAGTTGTCGGATCTTCAAACCGAGACCGAAGCGGCCGATTACGGTTAGTGCAGGCATGTTCGACATGCAAACCGTGGTGGTGTTTCTGAAGTACGCCACGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008514 True 246 mRNA 0.58 2 3020595 3021066

Neighbor

gene id symbol gene type direction distance location
AMCG00008510 prdx2 coding upstream 674 3016456 ~ 3019921 (+)
AMCG00008509 NA coding upstream 17035 2994941 ~ 3003560 (+)
AMCG00008505 NA coding upstream 113654 2904559 ~ 2906941 (+)
AMCG00008497 NA coding upstream 197499 2815396 ~ 2823096 (+)
AMCG00008498 keap1 coding upstream 209296 2798540 ~ 2811299 (+)
AMCG00008516 LOC106601330 coding downstream 66114 3087180 ~ 3102783 (+)
AMCG00008515 NA coding downstream 98043 3119109 ~ 3124136 (+)
AMCG00008517 NA coding downstream 110814 3131880 ~ 3137332 (+)
AMCG00008523 NA coding downstream 332039 3353105 ~ 3355395 (+)
AMCG00008525 NA coding downstream 396445 3417511 ~ 3426260 (+)
G49599 NA non-coding upstream 109656 2910694 ~ 2910939 (+)
G49598 NA non-coding upstream 109967 2909662 ~ 2910628 (+)
G49582 NA non-coding upstream 134457 2885831 ~ 2886138 (+)
G49541 NA non-coding upstream 207702 2812174 ~ 2812893 (+)
G49431 NA non-coding upstream 555928 2445185 ~ 2464667 (+)
G49636 LOC106607037,LOC105028343,LOC103364966,LOC106607038 non-coding downstream 6912 3027978 ~ 3042595 (+)
G49738 NA non-coding downstream 335633 3356699 ~ 3359529 (+)
G49754 NA non-coding downstream 393115 3414181 ~ 3443897 (+)
G49753 NA non-coding downstream 422936 3444002 ~ 3445127 (+)
G49914 NA non-coding downstream 942062 3963128 ~ 3964014 (+)
G49583 smarca4,LOC102779508 other upstream 131699 2886766 ~ 2888896 (+)
G49523 NA other upstream 250551 2765879 ~ 2770044 (+)
G49340 cdc37 other upstream 809081 2209483 ~ 2211514 (+)
AMCG00008476 NA other upstream 877201 2127715 ~ 2143394 (+)
AMCG00008475 NA other upstream 912803 2088480 ~ 2107792 (+)
AMCG00008526 NA other downstream 408831 3429897 ~ 3885604 (+)
G49980 NA other downstream 1135022 4156088 ~ 4160062 (+)
G49982 NA other downstream 1140992 4162058 ~ 4165483 (+)
AMCG00008580 pnpla6,LOC106564686 other downstream 1540925 4561991 ~ 4572874 (+)
G50215 NA other downstream 2574957 5596023 ~ 5596799 (+)

Expression


Co-expression Network