AMCG00008525


Basic Information

Item Value
gene id AMCG00008525
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 3417511 ~ 3426260 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008525
ttacattatattgcatgtctacatatttttataatatattgcacaATATTTCATTTCTGTATGGGGCAAAACAATATCTGCTGTTTGGTGTACAAAGTGCCAACCTTAGGCAAGTGTTCCCTGGCCAATTTACCATAGGATCTGTGCACTGTGAACATGTTTTACTGTGGTACTGCCCAAATGTTACaatgtgttattgtgttttttacgTGCACTCACAGTACTTTAATACACACTGTTTCAATACAGCCCAGTTTACCAGAGGAAGCATGCCATACGAATAGCGATCAAGGTAAATCATGGTATTCTCAAATTCCTTTGTGGTAAACTGTTGAACCCAAAGGAAATCAGAATTGCAGGTGCAGTTAACTGCAAAGAAGGAAAATGGGACTTTGGGTCTGGTTAACCTTTCTTTAGATTGAAATGTGTGGTGAAGGAATTCGTTTATAACAGCTGTTTCAAGccaaacatttatttctaagcATCTGTGACGAGTAATTGTTTTGACTGTGATTGTTGAGGACTGTGAGCCTAGACTTGATTGGCGCTACAATGTATATCTGAAACAACATTTCGTTTTCTTAAccaatgtgtatatttttgaagCAACATTTCGGAACcgatgtatatgtatattcaaAACGCAAAAGTGTTATATACATTTCTGGCACTAATAGGCTTCCGTCATGATCCTTTCAACTGTGCGCACAAGCCTCTCCATCCTGATCACACGGCGCCCTCGGCTGTGGCGCAGTCGCAGACGCGCAGGTGTAGCAATGCCCTTCCCAGCATGCCCTGCTCAGAGCCTCGTCCTGGCGCCGCGCGTTCAGGGGCGTCATTTGGCCGGACTGCGCAGCTGTGAAGATGCAGCGCGACCAGCGCACCGCCGAGCAGATCGCCGAGCTGCGGAGGAGGATCCGGATAATCGAGAGGGAAAGCAGTGCTTACTATGAGGACACTCAGCGTACCATCCAGAAGAACAAGGAAACGATTCTGCAGCTCCGGCAGCAGAACGAGAAGTTGCAGAAGAAGCTGGCGGACTCTTTAGCGAGAGACGAACGGGTGGTAAAGGATGCTTTTCAGGACAACAGAGTGGAGGGAGCTGCCATGAGGAACAAGACTGGGATGGCCGCTGTGCAGATCGTGGAGCAGAAGACGTGTGACACGATGAAGAAGCTCAACGCCCTGAGGCACCAAAAAAAGATTCGCCAGTGCTACCTGAAGAAGCTGCAGGCTCAGATGCTGGAGAACCGGCTGGAGAAGGCTCAGCTCAAGTGCCAGGCAGCCGAGCATATAACGCAGGTGTACCTGGAACTGAAGGCCCACCTCCAGGCTGTGACGGTCAACAGTGGGCACCAGAAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008525 True 1365 mRNA 0.47 6 3417511 3426260

Neighbor

gene id symbol gene type direction distance location
AMCG00008523 NA coding upstream 62116 3353105 ~ 3355395 (+)
AMCG00008517 NA coding upstream 280179 3131880 ~ 3137332 (+)
AMCG00008515 NA coding upstream 293375 3119109 ~ 3124136 (+)
AMCG00008516 LOC106601330 coding upstream 314728 3087180 ~ 3102783 (+)
AMCG00008514 NA coding upstream 396445 3020595 ~ 3021066 (+)
AMCG00008527 NA coding downstream 36143 3462403 ~ 3469127 (+)
AMCG00008529 NA coding downstream 141299 3567559 ~ 3581461 (+)
AMCG00008534 NA coding downstream 156861 3583121 ~ 3592683 (+)
AMCG00008533 LOC107553681 coding downstream 246441 3672701 ~ 3673436 (+)
AMCG00008540 LOC108440982,LOC108274416 coding downstream 258253 3684513 ~ 3688173 (+)
G49738 NA non-coding upstream 57982 3356699 ~ 3359529 (+)
G49636 LOC106607037,LOC105028343,LOC103364966,LOC106607038 non-coding upstream 374916 3027978 ~ 3042595 (+)
G49599 NA non-coding upstream 506572 2910694 ~ 2910939 (+)
G49598 NA non-coding upstream 506883 2909662 ~ 2910628 (+)
G49582 NA non-coding upstream 531373 2885831 ~ 2886138 (+)
G49753 NA non-coding downstream 17742 3444002 ~ 3445127 (+)
G49914 NA non-coding downstream 536868 3963128 ~ 3964014 (+)
G49938 NA non-coding downstream 598841 4025101 ~ 4026246 (+)
G49944 NA non-coding downstream 608489 4034749 ~ 4035052 (+)
G50011 NA non-coding downstream 881566 4307826 ~ 4308836 (+)
G49583 smarca4,LOC102779508 other upstream 528615 2886766 ~ 2888896 (+)
G49523 NA other upstream 647467 2765879 ~ 2770044 (+)
G49340 cdc37 other upstream 1205997 2209483 ~ 2211514 (+)
AMCG00008476 NA other upstream 1274117 2127715 ~ 2143394 (+)
AMCG00008475 NA other upstream 1309719 2088480 ~ 2107792 (+)
AMCG00008526 NA other downstream 3637 3429897 ~ 3885604 (+)
G49980 NA other downstream 729828 4156088 ~ 4160062 (+)
G49982 NA other downstream 735798 4162058 ~ 4165483 (+)
AMCG00008580 pnpla6,LOC106564686 other downstream 1135731 4561991 ~ 4572874 (+)
G50215 NA other downstream 2169763 5596023 ~ 5596799 (+)

Expression


Co-expression Network