AMCG00008534


Basic Information

Item Value
gene id AMCG00008534
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 3583121 ~ 3592683 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008534
ACGGCCTGGGAGTGCACAGGTTTGTGTGTCACGCTGCAACATGTGTCGCTTCTCTGAGGACCCTGGAGACGGTGCCCGGTACCCCGCTGTGATCCTGCTGCACCTGTTCCTGCTCTCCGCTGAGGTCCCCCCCGCCCCTGATCTCAGCCTGAGCCCGACCCCAGGGGGAGACTGGCAGGCGTTGTGCCGGGCCCCGCCGGGTCAGACCGGACAGACGTTCCTGCTGTTCCGAGATAAGCAGCAGGTGGACGTCATGGAGTTCCCCAACGAGGAGCAGCCGGTGGCCCAGTTCACTCTGGGGGCCCGCCCGGCCGAGCTCCAGGGACACTACTGCTGCCAGTACCAGACCCAGCGGGCCGGGGTGCCGGAATTCAGCGTCATGAGCCGGTATCAGTTCCTTGCACCACACGACTCCCTGGTAGTGCCCTCTCTGGTCCTGCTGTCCTGGGCATCCGACACCGGAGACAGCGTGACGGTGGAGTGCGTGGGTTCGGCCTCCTACCCCGGTGCCCAGTTCACCCTGTTCCTCATGGGCTCCGCCCTCCCCAAGCGCTCCTTCAACGCCCTCGCCACGCAGCACACCGCCCGCTTCACCCTGCCCGCCCCCCTCCAGCCCGGGGGCAGTAACTACGAGTGCCAGTACAGCTACTTGGTCGGCCAGGAGCGAAGGCACTCGCCCCGCAGCCCGCCCCTCCACATCCGCCCAGCAGGACGCACCTTCTCCACAGACCCAACCTCCCCTTCGTCCCCCACAGATTGGCCGTTGATTGCCGGATCGGTGTCGGCCAGCCTGCTGTTCGTCATGATCCTGGCAGTGCTGGGTGTTCTGCTGTACAGGAAAGtgaaACGGGCCGCcgaggagaagaggaagagAGATCCCTGCACTGAGGACTTGGGCACGACGGACTCGGTCACGGACACTGGTGACCGTGCGGTGTTGAGCCCGACCGGCAGCGGCACCCGCCAGCGCATCTCCTCCACCTCCGGGGCCCCTGCCTTCAGCACCTTCCGGGCCCTGCCGCCTTGAGCCCCCGCGCCGGCACACACTGTGCTCCTTACTTGCCCTTTGGATATATCCCACCCTGGCAAAGTGCTGGTCTCGGGCGCAGGGAGAGGAGCCCACACTGCCGCCGTGGCACCGACGCGGCAAAAGCACACATGGGCCGAGGAATCGAGAACGATACAGGGCCTCAACCTCAACGTGTGAATTATTCTTAGAGCTCCAAACCCGGGCCGAGGAGTCACGTGACTGCGGACACTTCCCGTTTCTCACAGAGCGCTCGCCTGATTGACGACTAGCCGCCATCGGGTTCAGGATGCAGGTGAACGGACCAGCCGCCCTGAACTGGGTGTAGAACTGCTGGACCGGAGATTGAGTTTCGTCTGCATCCTGTCATACTCGAGGGAGCACAGCCGGAGTGTCTTGCCTTTCAGGTGAAAAATATACTGtgcatttagaaaaagaaaaaataagaagaaagcAAAGTTTCATGTCAACCACTTCCTAtagcccccccacctccctgaATATTATGAAACTGTAAAAAAAGCCTTGCTTAATTTCCTGCAATGGTTCCTTCACTTCCACAGTGCCGTCACAAATGCAGTCGAACCCTAAACAGAGCTCCTCTGATTAATGGTCTTTTCTTCGTTTGTATATTATGCTGTAGTTTGTATGATTACTCTGTACTGTATGTTCACAactgtgtaataaaatatgacACGTTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008534 True 1730 mRNA 0.60 8 3583121 3592683

Neighbor

gene id symbol gene type direction distance location
AMCG00008529 NA coding upstream 1660 3567559 ~ 3581461 (+)
AMCG00008527 NA coding upstream 113994 3462403 ~ 3469127 (+)
AMCG00008525 NA coding upstream 156861 3417511 ~ 3426260 (+)
AMCG00008523 NA coding upstream 227726 3353105 ~ 3355395 (+)
AMCG00008517 NA coding upstream 445789 3131880 ~ 3137332 (+)
AMCG00008533 LOC107553681 coding downstream 80018 3672701 ~ 3673436 (+)
AMCG00008540 LOC108440982,LOC108274416 coding downstream 91830 3684513 ~ 3688173 (+)
AMCG00008542 NA coding downstream 142185 3734868 ~ 3735113 (+)
AMCG00008544 NA coding downstream 145063 3737746 ~ 3738114 (+)
AMCG00008545 NA coding downstream 145941 3738624 ~ 3742667 (+)
G49753 NA non-coding upstream 137994 3444002 ~ 3445127 (+)
G49754 NA non-coding upstream 139224 3414181 ~ 3443897 (+)
G49738 NA non-coding upstream 223592 3356699 ~ 3359529 (+)
G49636 LOC106607037,LOC105028343,LOC103364966,LOC106607038 non-coding upstream 540526 3027978 ~ 3042595 (+)
G49599 NA non-coding upstream 672182 2910694 ~ 2910939 (+)
G49914 NA non-coding downstream 370445 3963128 ~ 3964014 (+)
G49938 NA non-coding downstream 432418 4025101 ~ 4026246 (+)
G49944 NA non-coding downstream 442066 4034749 ~ 4035052 (+)
G50011 NA non-coding downstream 715143 4307826 ~ 4308836 (+)
G50055 NA non-coding downstream 869679 4462362 ~ 4468763 (+)
G49583 smarca4,LOC102779508 other upstream 694225 2886766 ~ 2888896 (+)
G49523 NA other upstream 813077 2765879 ~ 2770044 (+)
G49340 cdc37 other upstream 1371607 2209483 ~ 2211514 (+)
AMCG00008476 NA other upstream 1439727 2127715 ~ 2143394 (+)
AMCG00008475 NA other upstream 1475329 2088480 ~ 2107792 (+)
G49980 NA other downstream 563405 4156088 ~ 4160062 (+)
G49982 NA other downstream 569375 4162058 ~ 4165483 (+)
AMCG00008580 pnpla6,LOC106564686 other downstream 969308 4561991 ~ 4572874 (+)
G50215 NA other downstream 2003340 5596023 ~ 5596799 (+)
G50243 NA other downstream 2145858 5738541 ~ 5742750 (+)

Expression


Co-expression Network