Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00008546 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 3746220 ~ 3746808 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00008546 | True | 528 | mRNA | 0.61 | 2 | 3746220 | 3746808 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008541 | NA | coding | upstream | 115 | 3745827 ~ 3746105 (+) |
| AMCG00008543 | NA | coding | upstream | 2538 | 3742829 ~ 3743682 (+) |
| AMCG00008545 | NA | coding | upstream | 3553 | 3738624 ~ 3742667 (+) |
| AMCG00008544 | NA | coding | upstream | 8106 | 3737746 ~ 3738114 (+) |
| AMCG00008542 | NA | coding | upstream | 11107 | 3734868 ~ 3735113 (+) |
| AMCG00008538 | NA | coding | downstream | 12019 | 3758827 ~ 3771337 (+) |
| AMCG00008537 | NA | coding | downstream | 30684 | 3777492 ~ 3781027 (+) |
| AMCG00008539 | NA | coding | downstream | 36741 | 3783549 ~ 3785692 (+) |
| AMCG00008548 | LOC106601364,LOC106601190 | coding | downstream | 42787 | 3789595 ~ 3809072 (+) |
| AMCG00008549 | NA | coding | downstream | 64777 | 3811585 ~ 3819176 (+) |
| G49753 | NA | non-coding | upstream | 301093 | 3444002 ~ 3445127 (+) |
| G49754 | NA | non-coding | upstream | 302323 | 3414181 ~ 3443897 (+) |
| G49738 | NA | non-coding | upstream | 386691 | 3356699 ~ 3359529 (+) |
| G49636 | LOC106607037,LOC105028343,LOC103364966,LOC106607038 | non-coding | upstream | 703625 | 3027978 ~ 3042595 (+) |
| G49599 | NA | non-coding | upstream | 835281 | 2910694 ~ 2910939 (+) |
| G49914 | NA | non-coding | downstream | 216320 | 3963128 ~ 3964014 (+) |
| G49938 | NA | non-coding | downstream | 278293 | 4025101 ~ 4026246 (+) |
| G49944 | NA | non-coding | downstream | 287941 | 4034749 ~ 4035052 (+) |
| G50011 | NA | non-coding | downstream | 561018 | 4307826 ~ 4308836 (+) |
| G50055 | NA | non-coding | downstream | 715554 | 4462362 ~ 4468763 (+) |
| G49583 | smarca4,LOC102779508 | other | upstream | 857324 | 2886766 ~ 2888896 (+) |
| G49523 | NA | other | upstream | 976176 | 2765879 ~ 2770044 (+) |
| G49340 | cdc37 | other | upstream | 1534706 | 2209483 ~ 2211514 (+) |
| AMCG00008476 | NA | other | upstream | 1602826 | 2127715 ~ 2143394 (+) |
| AMCG00008475 | NA | other | upstream | 1638428 | 2088480 ~ 2107792 (+) |
| G49980 | NA | other | downstream | 409280 | 4156088 ~ 4160062 (+) |
| G49982 | NA | other | downstream | 415250 | 4162058 ~ 4165483 (+) |
| AMCG00008580 | pnpla6,LOC106564686 | other | downstream | 815183 | 4561991 ~ 4572874 (+) |
| G50215 | NA | other | downstream | 1849215 | 5596023 ~ 5596799 (+) |
| G50243 | NA | other | downstream | 1991733 | 5738541 ~ 5742750 (+) |
