AMCG00008549


Basic Information

Item Value
gene id AMCG00008549
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 3811585 ~ 3819176 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008549
GTAGTTTTGTAGGCCCCTCCCCCGTAGtagtaaaagaaagaaagacagttTTCGGCTACACCAAGTCAAGCCGCTTATCTCTGGTGCCACAAGTGCGCAGTGCATCTCCAGTGAAGCGGAGGCTCCGGCGCGCAGCGATGGTTACTGTCCCCAGTCGCAATGCACGCACTTACACCGCTGAAAAACGGCGCAGCTCTGTTATTTCTCTTTGCCAGTGTGGCTTCATTAGATGTAGGGCTGCGGGATATTGACACCAAAGCTGCACTGTTGCTGGCGGTGGAACCGGAGGAtccaaaatgttttgcagaGACGACGAGGAACCTAATATGTTTCTGGCAGGAGGACGGGCCCCCCGAAGCATACACCCTCACCTACCGATACCAAAGCGAGAGACAGAGCAGCAGGTGTACTGTGGTGGCGCAGAGGCTGGGTAATCAGACCCGTTACTTGTGCGAGCTGACCTCTGTGCAGCTCTTCATCCCGCTGGACATCAACGTGACCATGGGCGACCGCGTGGTTTTCAACAGAAGCCTGTCCATTGACCaagtctTCCTCCTGGATCCCCCAGGGAACCTGACGGTCACACGTACCGAGAAGCCGGACCAGCTGCTCCTGAGCTGGCTGCCCCCGAAGGTCAAGTACATGGATGATGTCATGATGTACGAGGTCAGCTTCTGGACGCCGGACTTTCAGCTCCACAAGACCAAGCTCGTGAAGGGCGAAACGGAGTACCAGCTGAAGGGGCTGTGGCCACAGACCGTCTACACTGCTCGGGTCCGAGTCAAACCGGACGGGCTCTCCTACAGCGGCTACTGGAGTGCCTGGACCGAGCCCGTCGCAATGGAAACGCCCCCGACAGAGGTGGACCTGCTCATCCTGCTCCTGTCGCTGGTCATCTTCCTGATCCTCGTCCTGCTGTCGCTCACCACCCTGCTGTCCCACCACAGGTTTCTGCTGAAGAAAGTGTGGCCGCTGATTCCCAGCCCAGAAAACAAATTCCCTGACCTGTTCACGGTCTACAAAGGGGACTTCCAGGAGTGGCTAGGCCAGAGCAACGCCCACCTGTGGTGGAGTCCGGGCTTCTTCTATGTCGAGGACCTGACCGCCCCTCTGGAGGTCCTGTCGGAGGTCAGGCCGGCTGCCCACCCCGGGCCCAGCACGGTGCCCCCCAGAGCCTGGCCGCAGGTCCCGGCGGACGAGGAGGGGGAGTGGCAGgcgggggaggaggaggagcagcagggaCACCTGGACTCGGAGCAGTGGAAGGCGGCACGCGACCTCTGGCTGTCCTACAACCGCGCCTCCCTGGCCGGGCCACTGGAGTCCAAAGATGCTTATGTGATCTTGAGCCCCGACTGCCTCCAGGCCGGGCCCCAGCCGCAGCAGGGCAGCGAGCACGATGTTTCCGAAGAGGAGTCTCCCCTGCAGATGTTGTTCTCCCAGTCCGATCCGGGAACGCcaacctcctcttcctcctccgcCCGCGGCTCTCTCAGGCACAGCTCTGGCTCCGCATCGGGGGACCAGCCCTCCTTGGGCACCAGTTCCGACCTGTACAATCCCAGCGTGGGCCTGCTTTACCCCCGTACCTGGCCCCCAAAGGACTCCTCCTACGCTTACCTGACGGTGGCTGACTCGGGTATCTCCATGGACTACAGCCCCATGGGCTCAAGCAGGACTGAAGTGATCTATGCAAACGAGTACAAGAACCACATCCCTCTGACACCAAACCAGCTGCCCCTCCCCTGCCACACTGTCCCCATTGGCTGCTGAGTGGGAGGATAGTACCTTTGGATTGGCATGATGTTGGTGACAGTCAACATCGGGCGCACGAATGCTTGCAGTTCTCCGATTTGCAGGTTGGCTCTGGGGATTTGAGACATTGTCATAAGACCAGCTGACATGGACAGGGCCTTCCTGGAAGCTGTTTAGAGAGGGGGTGAGAGGCTCCCACAGCTGATCACTCTGTTCTCAGTGGGAGGCAGTGAGGCCAACGTAGAGCTCGGAGCAGGGTTTAACCCAGGCAGGAGGAAGTGTCTGAAGAACCTCATGCACCACACAGGTGGCAGTGTGGCAGCTCAACTGGTTGGGATCTCCACTTCtgtgttataaatatatttttaaaaggaaaaaaagggttactttttataatctttttttattattattccaagtattattattcatgttttaatttgatgtagGTTTTACCATGTCTTTTCCTGTGGCATTGCTtctggttattctgtgtcatgTCACACAGAGCCCTGCCCTATTAAATCAAGAGATGGAATGAGGGGGACAAAATTCCCAGCACCACATGGAGCACAGATAAATGCGCGGGGGTCTGCTAGCTTGGTGTGGTGCATCACGCAGAGCTCTGATGCACAGGGTCAATGCACAAGGCAGCTATTTACACAATGGGTGTGGGAGAGCACGGTGGCgaaaatgtaactatttttgCAGGGATTTTCCTCCTGAAATTGCACCACTCTGTAGTCCACGTTCCCCGATTCCTGATTGGATGATTATTAATGCCAGCCAGACATCCCTGCAGAATAACTCTTGAGTTCAGTGTGGTACAGCACCGTGCCACAAAGCGCCTTTGTGAAACCTTACAGCTACACATCCCCACTCTTCAGTTACTGTTACAAGATGCTTCACAGCCCTCGGGCATTCCCTCAATCTAGTGCAGGGCTCTGAACGTTTCCCAGAATGCAGTGCAAACCCGTGCGCAGCTTTCGCTGCCAAATCAACAGCGGTCGGTTCCCCCGACTTATTCAACCATCGTAACGACTGCCGAGATGGTCTGGAATCGAAGCTGAAGGGCTATAGCTGTGTCTGAAAATCAGTGTTAGAATTTCCATTGGCTCCTCTGTCATTTTATACCCTCCCACGCTATATACTCTTCAGGAGGCAGCGTGCTTGTGTGTTGCCTTCCCTCCAAGCTGTGCAACTGAAGTTTTATGTTTCCACCTGTAGCTACAACCTGTTTGAACTACCCATTGTAAACCACCTGTCAGTTTGCAGTGCATTGGAGCAACAGTCATCGATGAGATGGCATTGGAGTCCAGAGAACGGCCGCTCGGTTCTCGTCAGTCTCGCTGAAGATATTTTCTCATCTGTAGCGgcctcttcccctctcccacAGCTTTGCTGTTCCCTTTGCTGGTCATTCCTGAATGCATTGGCAATTTGTAAATACTTGAACCGTGTTTTCTATCGCGTACTTgtacagagatttatttttttatgatgctACCGACCTTTACTGAAACCTGgagtgtacctgtgtgtgtaagATCTGTATACATTGTAGGGTTCAGCTAGGCGGATGTtatgttacagtttttaaaaataaaatgtcttaaacTGCACACAA

Function

GO: NA

KEGG:

id description
K05079 EPOR; erythropoietin receptor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008549 True 3382 mRNA 0.54 8 3811585 3819176

Neighbor

gene id symbol gene type direction distance location
AMCG00008548 LOC106601364,LOC106601190 coding upstream 2513 3789595 ~ 3809072 (+)
AMCG00008539 NA coding upstream 25893 3783549 ~ 3785692 (+)
AMCG00008537 NA coding upstream 30558 3777492 ~ 3781027 (+)
AMCG00008538 NA coding upstream 40248 3758827 ~ 3771337 (+)
AMCG00008546 NA coding upstream 64777 3746220 ~ 3746808 (+)
AMCG00008550 znf653,LOC106601191,LOC106601361 coding downstream 4818 3823994 ~ 3834579 (+)
AMCG00008551 NA coding downstream 17957 3837133 ~ 3844620 (+)
AMCG00008552 NA coding downstream 37396 3856572 ~ 3861390 (+)
AMCG00008556 gcdh,LOC102794743,LOC100704678 coding downstream 114826 3934002 ~ 3939913 (+)
AMCG00008555 NA coding downstream 138365 3957541 ~ 3961050 (+)
G49753 NA non-coding upstream 366458 3444002 ~ 3445127 (+)
G49754 NA non-coding upstream 367688 3414181 ~ 3443897 (+)
G49738 NA non-coding upstream 452056 3356699 ~ 3359529 (+)
G49636 LOC106607037,LOC105028343,LOC103364966,LOC106607038 non-coding upstream 768990 3027978 ~ 3042595 (+)
G49599 NA non-coding upstream 900646 2910694 ~ 2910939 (+)
G49914 NA non-coding downstream 143952 3963128 ~ 3964014 (+)
G49938 NA non-coding downstream 205925 4025101 ~ 4026246 (+)
G49944 NA non-coding downstream 215573 4034749 ~ 4035052 (+)
G50011 NA non-coding downstream 488650 4307826 ~ 4308836 (+)
G50055 NA non-coding downstream 643186 4462362 ~ 4468763 (+)
G49583 smarca4,LOC102779508 other upstream 922689 2886766 ~ 2888896 (+)
G49523 NA other upstream 1041541 2765879 ~ 2770044 (+)
G49340 cdc37 other upstream 1600071 2209483 ~ 2211514 (+)
AMCG00008476 NA other upstream 1668191 2127715 ~ 2143394 (+)
AMCG00008475 NA other upstream 1703793 2088480 ~ 2107792 (+)
G49980 NA other downstream 336912 4156088 ~ 4160062 (+)
G49982 NA other downstream 342882 4162058 ~ 4165483 (+)
AMCG00008580 pnpla6,LOC106564686 other downstream 742815 4561991 ~ 4572874 (+)
G50215 NA other downstream 1776847 5596023 ~ 5596799 (+)
G50243 NA other downstream 1919365 5738541 ~ 5742750 (+)

Expression


Co-expression Network