Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00008586 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 4616815 ~ 4621744 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00008586 | True | 264 | mRNA | 0.52 | 2 | 4616815 | 4621744 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008581 | pnpla6,LOC108258612 | coding | downstream | 56445 | 4515772 ~ 4560370 (-) |
| AMCG00008578 | NA | coding | downstream | 216425 | 4378084 ~ 4400390 (-) |
| AMCG00008572 | NA | coding | downstream | 254540 | 4353825 ~ 4362275 (-) |
| AMCG00008574 | NA | coding | downstream | 263725 | 4335677 ~ 4353090 (-) |
| AMCG00008577 | NA | coding | downstream | 283915 | 4329574 ~ 4332900 (-) |
| AMCG00008584 | NA | coding | upstream | 108 | 4621852 ~ 4643616 (-) |
| AMCG00008585 | NA | coding | upstream | 40577 | 4662321 ~ 4673615 (-) |
| AMCG00008583 | LOC104945820,LOC101076945 | coding | upstream | 58786 | 4680530 ~ 4697781 (-) |
| AMCG00008582 | qtrt1 | coding | upstream | 136929 | 4758673 ~ 4767261 (-) |
| AMCG00008589 | NA | coding | upstream | 235163 | 4856907 ~ 4864403 (-) |
| G50020 | NA | non-coding | downstream | 294927 | 4318783 ~ 4321888 (-) |
| G49984 | NA | non-coding | downstream | 453165 | 4162175 ~ 4163650 (-) |
| G49863 | NA | non-coding | downstream | 807553 | 3723229 ~ 3809262 (-) |
| G49871 | NA | non-coding | downstream | 835711 | 3779775 ~ 3781104 (-) |
| G49860 | NA | non-coding | downstream | 881338 | 3720969 ~ 3735477 (-) |
| G50126 | NA | non-coding | upstream | 198496 | 4820240 ~ 4829621 (-) |
| G50268 | NA | non-coding | upstream | 1319451 | 5941195 ~ 5941527 (-) |
| G50337 | LOC104962440 | non-coding | upstream | 1720932 | 6342676 ~ 6342964 (-) |
| G50361 | NA | non-coding | upstream | 2004365 | 6626109 ~ 6627025 (-) |
| G50372 | NA | non-coding | upstream | 2025267 | 6647011 ~ 6651343 (-) |
| AMCG00008554 | NA | other | downstream | 745546 | 3430814 ~ 3871269 (-) |
| AMCG00008547 | elof1,LOC103393660,LOC100703874,LOC106589640,LOC106935058 | other | downstream | 839461 | 3769684 ~ 3777354 (-) |
| G49605 | NA | other | downstream | 1708150 | 2906675 ~ 2908665 (-) |
| AMCG00008491 | prkcsh,LOC102779661 | other | downstream | 1914393 | 2636915 ~ 2702422 (-) |
| AMCG00008474 | NA | other | downstream | 2531790 | 2073783 ~ 2085025 (-) |
| AMCG00008602 | NA | other | upstream | 965331 | 5587075 ~ 5610329 (-) |
| AMCG00008609 | NA | other | upstream | 1033945 | 5655689 ~ 5786328 (-) |
| G50267 | LOC107575789 | other | upstream | 1127146 | 5748890 ~ 5885450 (-) |
| AMCG00008608 | NA | other | upstream | 1164876 | 5786620 ~ 5793995 (-) |
| AMCG00008633 | prkaca,LOC108429687 | other | upstream | 2217333 | 6839077 ~ 6885687 (-) |
