AMCG00008595


Basic Information

Item Value
gene id AMCG00008595
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 5109716 ~ 5110501 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008595
ATGGGACACGCGCTGCACCATGTGCGCGCCGAGCAGAAGAGGAGGGAGGCGGAGCGCGCCGGGCTTGGGGCCCTTGAGCCGGGGGAGAACGATTCCTTGATCGCCAGCAAGGACTGTGACCCCCCGCCCCGGGAGGAGCAGGTCTCCCGCTTCCGGCTGCGCGGCTCCCTGCTGCAGACCTACGTGTGCAGCATCCTGCTTAGGACCGTCTTTGAGGTGGGCTTCATCCTGGGCCAGTACTTCATTTACGGCATCTTCCTGACGGGCATGTACAAGTGCAGCCGCTGGCCCTGCCCCAACGTGGTGGACTGCTTCGTGTCCCGGCCCACGGAGAAGAACATCTTCATCGTCTTCATGCTGACGGTGGCCTGCGTCTCCTTGCTGCTGAACCTCATCGAGATGTACCACCTGGGCTGGAGGAAGTTCAAAGAGGGCTTGACCAGCACCTTCAGGTCCCAGGCGGCCAGCGCCCAGGACCAGCCCGCCACACCCAAGCTGGGGTACGTCACCCTGGCTGGCTGGAAAGCGCCAGTGGCACCCAGTTCACCCTCCAGCTGCCAGCCCTCGCCCAAACTCAAGCACTTCACCAACAAGCTGGCCAGCGAGCAGAACTGGGTCAATCTGGCCACGGAGCAGGGCAGAACGGAGAGGAGCACGGCCGGGGCTCACCACACTGGGCACCTGCTGGCCCCCGTGCTGCCGGACCAGGCGGACTCACCCCGGCTGGGCAAAGGCCGGCACTTGAGAAGCAGCCGTGCTGGCAGCCGCGAGAGGGTCCTCGTGTGA

Function

GO:

id name namespace
GO:0010644 cell communication by electrical coupling biological_process
GO:0055008 cardiac muscle tissue morphogenesis biological_process
GO:0003161 cardiac conduction system development biological_process
GO:0055085 transmembrane transport biological_process
GO:0008016 regulation of heart contraction biological_process
GO:0048050 post-embryonic eye morphogenesis biological_process
GO:0044425 obsolete membrane part cellular_component
GO:0005886 plasma membrane cellular_component
GO:0055077 gap junction hemi-channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008595 True 786 mRNA 0.65 1 5109716 5110501

Neighbor

gene id symbol gene type direction distance location
AMCG00008591 NA coding downstream 156350 4945409 ~ 4953366 (-)
AMCG00008592 NA coding downstream 215197 4890068 ~ 4894519 (-)
AMCG00008589 NA coding downstream 245313 4856907 ~ 4864403 (-)
AMCG00008582 qtrt1 coding downstream 342455 4758673 ~ 4767261 (-)
AMCG00008583 LOC104945820,LOC101076945 coding downstream 411935 4680530 ~ 4697781 (-)
AMCG00008599 NA coding upstream 46794 5157295 ~ 5165357 (-)
AMCG00008597 adgrl1,LOC107599314,LOC107711219 coding upstream 66098 5176599 ~ 5200865 (-)
AMCG00008596 adgrl1,LOC107661818,LOC107599314 coding upstream 103895 5214396 ~ 5222563 (-)
AMCG00008598 LOC106594611 coding upstream 152651 5263152 ~ 5276428 (-)
AMCG00008600 NA coding upstream 454027 5564528 ~ 5585037 (-)
G50126 NA non-coding downstream 280095 4820240 ~ 4829621 (-)
G50020 NA non-coding downstream 787828 4318783 ~ 4321888 (-)
G49984 NA non-coding downstream 946066 4162175 ~ 4163650 (-)
G49863 NA non-coding downstream 1300454 3723229 ~ 3809262 (-)
G50268 NA non-coding upstream 830694 5941195 ~ 5941527 (-)
G50337 LOC104962440 non-coding upstream 1232175 6342676 ~ 6342964 (-)
G50361 NA non-coding upstream 1515608 6626109 ~ 6627025 (-)
G50372 NA non-coding upstream 1536510 6647011 ~ 6651343 (-)
G50381 tecr,LOC107703756,LOC107573605,LOC107594239,LOC107390378 non-coding upstream 1582305 6692806 ~ 6706289 (-)
AMCG00008554 NA other downstream 1238447 3430814 ~ 3871269 (-)
AMCG00008547 elof1,LOC103393660,LOC100703874,LOC106589640,LOC106935058 other downstream 1332362 3769684 ~ 3777354 (-)
G49605 NA other downstream 2201051 2906675 ~ 2908665 (-)
AMCG00008491 prkcsh,LOC102779661 other downstream 2407294 2636915 ~ 2702422 (-)
AMCG00008474 NA other downstream 3024691 2073783 ~ 2085025 (-)
AMCG00008602 NA other upstream 476574 5587075 ~ 5610329 (-)
AMCG00008609 NA other upstream 545188 5655689 ~ 5786328 (-)
G50267 LOC107575789 other upstream 638389 5748890 ~ 5885450 (-)
AMCG00008608 NA other upstream 676119 5786620 ~ 5793995 (-)
AMCG00008633 prkaca,LOC108429687 other upstream 1728576 6839077 ~ 6885687 (-)

Expression


Co-expression Network