Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00008607 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 5844345 ~ 5847681 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016757 | transferase activity, transferring glycosyl groups | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00008607 | True | 507 | mRNA | 0.51 | 4 | 5844345 | 5847681 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008605 | NA | coding | upstream | 67663 | 5766764 ~ 5776682 (+) |
| AMCG00008606 | NA | coding | upstream | 86710 | 5744804 ~ 5757635 (+) |
| AMCG00008601 | NA | coding | upstream | 208597 | 5614919 ~ 5635748 (+) |
| AMCG00008594 | NA | coding | upstream | 735541 | 5094364 ~ 5108804 (+) |
| AMCG00008593 | LOC107093428 | coding | upstream | 788589 | 5042754 ~ 5055756 (+) |
| AMCG00008604 | NA | coding | downstream | 34312 | 5881993 ~ 5883048 (+) |
| AMCG00008616 | NA | coding | downstream | 183166 | 6030847 ~ 6045870 (+) |
| AMCG00008617 | NA | coding | downstream | 261282 | 6108963 ~ 6119352 (+) |
| AMCG00008618 | NA | coding | downstream | 340813 | 6188494 ~ 6207751 (+) |
| AMCG00008619 | NA | coding | downstream | 458045 | 6305726 ~ 6363030 (+) |
| G50214 | NA | non-coding | upstream | 249293 | 5594712 ~ 5595052 (+) |
| G50213 | NA | non-coding | upstream | 251414 | 5592436 ~ 5592931 (+) |
| G50212 | NA | non-coding | upstream | 253144 | 5586800 ~ 5591201 (+) |
| G50206 | NA | non-coding | upstream | 264323 | 5579222 ~ 5580022 (+) |
| G50196 | NA | non-coding | upstream | 283736 | 5560021 ~ 5560609 (+) |
| G50255 | NA | non-coding | downstream | 93526 | 5941207 ~ 5941527 (+) |
| G50336 | LOC104962440 | non-coding | downstream | 495013 | 6342694 ~ 6342978 (+) |
| G50340 | NA | non-coding | downstream | 524751 | 6372432 ~ 6372911 (+) |
| G50342 | NA | non-coding | downstream | 526984 | 6374665 ~ 6375034 (+) |
| G50346 | NA | non-coding | downstream | 642976 | 6490657 ~ 6518591 (+) |
| G50243 | NA | other | upstream | 101595 | 5738541 ~ 5742750 (+) |
| G50215 | NA | other | upstream | 247546 | 5596023 ~ 5596799 (+) |
| AMCG00008580 | pnpla6,LOC106564686 | other | upstream | 1271471 | 4561991 ~ 4572874 (+) |
| G49982 | NA | other | upstream | 1678862 | 4162058 ~ 4165483 (+) |
| G49980 | NA | other | upstream | 1684283 | 4156088 ~ 4160062 (+) |
| G50448 | NA | other | downstream | 1109930 | 6957611 ~ 7018125 (+) |
| AMCG00008639 | NA | other | downstream | 1449205 | 7296886 ~ 7315850 (+) |
| G50583 | NA | other | downstream | 2086148 | 7933829 ~ 7939771 (+) |
| AMCG00008664 | Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 | other | downstream | 2431172 | 8278853 ~ 8324778 (+) |
| G50747 | NA | other | downstream | 2602485 | 8450166 ~ 8666548 (+) |
