AMCG00008608


Basic Information

Item Value
gene id AMCG00008608
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 5786620 ~ 5793995 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008608
ATGGAGTATGTGTTAGACCAGTCGTTCTTCAAGGAGCAGAAAACTGAATCAGCTGTAATGAATTCCCATGTGGTGACAGGCATGCTTGGGCACAGAAACTACACTGACCTTCCACACCCTGTGAAGTTTACCTTTCTGAACAAGATGCCAAAAATTATAGGGAAAGAGGTGATCTGTGTCTACTGGAAACAAGACCACTGGACCCGTGAAGGCTGTGAGTCTTCGAGGTCAAACGAAACTCACACAGAATGCAGCTGCACACATCTGTCCAGCTTTGCTGTCATAATCCTGTTCTTCCTTGGCTTGGCCATTATAACTTTCATCTGCTGCCACTTGGACCCCAGGATCAGCACCACGTCTCGTCTGCATTTGAGCATCTGCCTCTTCCTGGcacactttatttttgtaacagtgGAACGCAGGGGTGAAATTAAGGTGTTGTGTGCAGTGATAGCAGCAGTCCTCCATTACCTCTTCTTGGCCTGCTTCACCTGGATGAGTCTGGAGGCTGTGTACCTGTTCCTAAAGGTGAGGAACCTGAAGGTCATCAAACCCAATCACCACCAATCACTAGGAAGCAGATACCAACTGCTGGCTGGGTACGGCATCCCTGCCATCATTGTGGCCGTGTCTGCAGGAGCGTTTCCAGGTGGCTACGGGAGGGAGGATGAgTCCTGTGCCCACGACAAGGGGGCAGGAAAAGATTATGCTCAATTATAA
>TU62882
GTCTTCGAGGTCAAACGAAACTCACACAGAATGCAGCTGCACACATCTGTCCAGCTTTGCTGTCATAATGTCAATGAAGCCAATGCAGgataatacaatattaaacatCGTTGAATATGTCCTTGTGGCCGTGAGCCTGTTCTTCCTTGGCTTGGCCATTATAACTTTCATCTGCTGCCACTTGGACCCCAGGATCAGCACCACGTCTCGTCTGCATTTGAGCATCTGCCTCTTCCTGGcacactttatttttgtaacagtgGAACGCAGGGGTGAAATTAAGGTGTTGTGTGCAGTGATAGCAGCAGTCCTCCATTACCTCTTCTTGGCCTGCTTCACCTGGATGAGTCTGGAGGCTGTGTACCTGTTCCTAAAGGTGAGGAACCTGAAGGTCATCAAACCCAATCACCACCAATCACTAGGAAGCAGATACCAACTGCTGGCTGGGTACGGCATCCCTGCCATCATTGTGGCCGTGTCTGCAGGAGCGTTTCCAGGTGGCTACGGGAGGGAGGATGAGT

Function

GO:

id name namespace
GO:0042981 regulation of apoptotic process biological_process
GO:0010941 regulation of cell death biological_process
GO:0043067 regulation of programmed cell death biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008608 True 720 mRNA 0.49 5 5786620 5793995
TU62882 False 521 TUCP 0.50 3 5787750 5792584

Neighbor

gene id symbol gene type direction distance location
AMCG00008603 NA coding downstream 133088 5635772 ~ 5653532 (-)
AMCG00008600 NA coding downstream 201583 5564528 ~ 5585037 (-)
AMCG00008598 LOC106594611 coding downstream 510192 5263152 ~ 5276428 (-)
AMCG00008596 adgrl1,LOC107661818,LOC107599314 coding downstream 564057 5214396 ~ 5222563 (-)
AMCG00008597 adgrl1,LOC107599314,LOC107711219 coding downstream 585755 5176599 ~ 5200865 (-)
AMCG00008610 NA coding upstream 130569 5924564 ~ 5934702 (-)
AMCG00008612 NA coding upstream 155321 5949316 ~ 5951869 (-)
AMCG00008611 NA coding upstream 255821 6049816 ~ 6052478 (-)
AMCG00008614 NA coding upstream 472003 6265998 ~ 6295839 (-)
AMCG00008615 NA coding upstream 527406 6321401 ~ 6331672 (-)
G50126 NA non-coding downstream 956999 4820240 ~ 4829621 (-)
G50020 NA non-coding downstream 1464732 4318783 ~ 4321888 (-)
G49984 NA non-coding downstream 1622970 4162175 ~ 4163650 (-)
G49863 NA non-coding downstream 1977358 3723229 ~ 3809262 (-)
G50268 NA non-coding upstream 147200 5941195 ~ 5941527 (-)
G50337 LOC104962440 non-coding upstream 548681 6342676 ~ 6342964 (-)
G50361 NA non-coding upstream 832114 6626109 ~ 6627025 (-)
G50372 NA non-coding upstream 853016 6647011 ~ 6651343 (-)
G50381 tecr,LOC107703756,LOC107573605,LOC107594239,LOC107390378 non-coding upstream 898811 6692806 ~ 6706289 (-)
AMCG00008609 NA other downstream 292 5655689 ~ 5786328 (-)
AMCG00008602 NA other downstream 176291 5587075 ~ 5610329 (-)
AMCG00008554 NA other downstream 1915351 3430814 ~ 3871269 (-)
AMCG00008547 elof1,LOC103393660,LOC100703874,LOC106589640,LOC106935058 other downstream 2009266 3769684 ~ 3777354 (-)
G49605 NA other downstream 2877955 2906675 ~ 2908665 (-)
AMCG00008633 prkaca,LOC108429687 other upstream 1045082 6839077 ~ 6885687 (-)
AMCG00008634 NA other upstream 1126712 6920707 ~ 6933089 (-)
G50476 NA other upstream 1153894 6947889 ~ 7151472 (-)
G50602 NA other upstream 2107340 7901335 ~ 7902606 (-)
G50656 NA other upstream 2340586 8134581 ~ 8135414 (-)

Expression


Co-expression Network