AMCG00008615


Basic Information

Item Value
gene id AMCG00008615
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 6321401 ~ 6331672 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008615
aTTGATGAATGTTCCAAAAATGCTTCGCTCTGTGGATTAAATGCAGAGTGTTTCAACAAAGGTGGAGGATTTGACTGTGCATGTAAACAGGATTATCTTCCCTCCCCTGGACTTGATTGGgaatttggaaaaacaaagtGTGTGAAGCCAAACTGCCCAGATaatgcTCTAAAGGAGCTATGTCTTTCCAATATtgttctggaaaaaatgaaagcaaatccAAACATGGTTCTACCAGAAATGGTTAAAGTTAGCTTGACAGCCATTGGACCTGACACAAACTTGACCACAATCCCTATTCTGGAAGCTAAAGCAAATGTTATGGAAATCAATCTGCTAAGCATTGCCAAGCACAATAATGGTTCTGCAGCAGCAATTTTCATTTCCTACTCTGATGGTGCTACAGATTCCTTATTACGTGCTGACTTTCTCAAGACTGAAAATGTAACCGAGATGTTTTCAGATGTTGTATCGGGAAGAATAGCCAAAACACCAATCACAAATCTCTCAGAGCCTGTTAATTTCaccttaaaacataaaatgTCCAAAGCAGATAATGGTCTGATGACCTGTGTCTACTGGAAAATATCAGATGAAGAACAGTTTTGGTCTGTTGAAGGCTGCACAGCAACATTCTCCAACACAACGTACACTGTGTGCAGCTGTACCCATCTCTCCACCTTTGCCTTAATAATGCAAACGGAGAGAGTGGTCCAGAATGATGACTTGCTGGACCAAATCAACAAAGTGCTTGTGATAATAGGTCTGTTTTTCTTCGCCTTGGCCATTATAACCTTTGTTTTCTGCCGCTGGAATCCAAAAATCAACAACACCGCTCGCCTCAACCTCTGTATCTGCCTCTTCCTGGCTCACCTTATCTTTCTGGTTGCGGTGTCTCACACAGAGAACAAGGTGATTTGTTCAATCATAGCTGGGGTCCTGCACTATCTGTTCCTGTCTGCCTTTGTGTGGATGTTTCTGGAGTCGATTCAGCTATTTCTGCTGGTGAGAAGTCTGACCAAAGTGAGGATCATCCATAGAGAAGGGCTCCGGCCTCTATACCTGCTGCTGATTGGGTACAGCATCCCTGTTGTTGTGGTCAACTTTCTTCTCTTTGGTGCAATTATGTGGTGTATCCGATCTACTCTGATTAACATGAAGAGTGATGTCTCCCAAGTGAAAGACACTAGgataattattttcaaagctgtTGTCCAGTTTGTCATATTGGGCTGTGGCTGGATCCTAGGCTTCTTCCCAGGTACCCCTCTGTTATCTTACCTGTTTATCGTGCTCAACTCACAGCAGGGGACTTTTATCTTCATTGTTCACTGCCTGCTCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008615 True 1347 mRNA 0.43 10 6321401 6331672

Neighbor

gene id symbol gene type direction distance location
AMCG00008614 NA coding downstream 25562 6265998 ~ 6295839 (-)
AMCG00008611 NA coding downstream 268923 6049816 ~ 6052478 (-)
AMCG00008612 NA coding downstream 369532 5949316 ~ 5951869 (-)
AMCG00008610 NA coding downstream 386699 5924564 ~ 5934702 (-)
AMCG00008603 NA coding downstream 667869 5635772 ~ 5653532 (-)
AMCG00008613 NA coding upstream 41852 6373524 ~ 6376656 (-)
AMCG00008620 NA coding upstream 59472 6391144 ~ 6397022 (-)
AMCG00008622 NA coding upstream 84268 6415940 ~ 6470733 (-)
AMCG00008621 NA coding upstream 188859 6520531 ~ 6556299 (-)
AMCG00008625 NA coding upstream 259561 6591233 ~ 6600261 (-)
G50268 NA non-coding downstream 379874 5941195 ~ 5941527 (-)
G50126 NA non-coding downstream 1491780 4820240 ~ 4829621 (-)
G50020 NA non-coding downstream 1999513 4318783 ~ 4321888 (-)
G49984 NA non-coding downstream 2157751 4162175 ~ 4163650 (-)
G49871 NA non-coding downstream 2540297 3779775 ~ 3781104 (-)
G50337 LOC104962440 non-coding upstream 11004 6342676 ~ 6342964 (-)
G50361 NA non-coding upstream 294437 6626109 ~ 6627025 (-)
G50372 NA non-coding upstream 315339 6647011 ~ 6651343 (-)
G50381 tecr,LOC107703756,LOC107573605,LOC107594239,LOC107390378 non-coding upstream 361134 6692806 ~ 6706289 (-)
G50435 NA non-coding upstream 572405 6904077 ~ 6904389 (-)
G50267 LOC107575789 other downstream 435951 5748890 ~ 5885450 (-)
AMCG00008608 NA other downstream 527406 5786620 ~ 5793995 (-)
AMCG00008609 NA other downstream 535073 5655689 ~ 5786328 (-)
AMCG00008602 NA other downstream 711072 5587075 ~ 5610329 (-)
AMCG00008554 NA other downstream 2450132 3430814 ~ 3871269 (-)
AMCG00008633 prkaca,LOC108429687 other upstream 507405 6839077 ~ 6885687 (-)
AMCG00008634 NA other upstream 589035 6920707 ~ 6933089 (-)
G50476 NA other upstream 616217 6947889 ~ 7151472 (-)
G50602 NA other upstream 1569663 7901335 ~ 7902606 (-)
G50656 NA other upstream 1802909 8134581 ~ 8135414 (-)

Expression


Co-expression Network