AMCG00008617


Basic Information

Item Value
gene id AMCG00008617
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 6108963 ~ 6119352 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008617
GATTTGCAGCTGTTTCATTTATGTCATATATTGGAATGGAAAAACTTCTTAAAGCCAAATACttggaaacaaaaaatgacacAACAATGCTGTCAGATGTTGTAGAAGGCTCtttgctgaaaacaaacaaaactgtaatgcaTCCTGTAAATTTTACATTGAAACATATCCAGgcAGTACAGACAAATGGATTGTTGACCTGTGTGTACTGGGATCACAACAAATGGTCTTTGGAAGGCTGTACAAAAACAGATGAGAATGACACGCACACAACATGTAGCTGTACTCACCTTTCGACTTTTGCACTGATAATGCAGactgaaaacaattacaaggaatATCAACAGCTGCAGAGGATCAGCAATATTGTTGTGATTATTGGCCTGGTTTTCCTTGGCCTGGCCATTTTAACCTTTGTGTTTTGTACATGGAATCCTAAGATCAACAACACTGCTCGTCTCCATCTCAGCATCTGCCTGTTCCTGTCTCACACACTCTTTCTGATTGTGGACATCCAGATAATGAATCTCAAAAAATATgagGTTCTGTGTTCAGCAATTGCTGGCACCCTGCACTACCTCTTTCTGTGCAGCTTTGCATGGATGTTCCTGGAGGCAATTCAGCTCTACCTACTAGTAAAGAACTTGAAGAAAGTGAAGGTCTTACAGAGACAAGGATTGCATTGTGGCTACCTTTTACTAATTGGATATGGTGTCCCTACAATTATTGTAGCTGTGTCAGCAGGAGTCATTCCTAAGGGATATGGCGATGAACAGGTGATGGTGTTTAAAGCCCTTATGCAGTTTGTGATATTAGGCTGTGGTTGGCTGCTAGGCTTCTTTAATGAACCTGACTTCATCCGCCACCTGTTTGTTTTGCTCAATTCACAACAGGGGACCTTTATTTTCATAGTTCACTGTTTGCTAAACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008617 True 932 mRNA 0.40 5 6108963 6119352

Neighbor

gene id symbol gene type direction distance location
AMCG00008616 NA coding upstream 63093 6030847 ~ 6045870 (+)
AMCG00008604 NA coding upstream 225915 5881993 ~ 5883048 (+)
AMCG00008607 NA coding upstream 261282 5844345 ~ 5847681 (+)
AMCG00008605 NA coding upstream 332281 5766764 ~ 5776682 (+)
AMCG00008606 NA coding upstream 351328 5744804 ~ 5757635 (+)
AMCG00008618 NA coding downstream 69142 6188494 ~ 6207751 (+)
AMCG00008619 NA coding downstream 186374 6305726 ~ 6363030 (+)
AMCG00008626 tecr,LOC107573605,LOC107703756,LOC107694603 coding downstream 573393 6692745 ~ 6719091 (+)
AMCG00008629 NA coding downstream 628359 6747711 ~ 6748885 (+)
AMCG00008641 NA coding downstream 1234913 7354265 ~ 7354886 (+)
G50255 NA non-coding upstream 167436 5941207 ~ 5941527 (+)
G50214 NA non-coding upstream 513911 5594712 ~ 5595052 (+)
G50213 NA non-coding upstream 516032 5592436 ~ 5592931 (+)
G50212 NA non-coding upstream 517762 5586800 ~ 5591201 (+)
G50206 NA non-coding upstream 528941 5579222 ~ 5580022 (+)
G50336 LOC104962440 non-coding downstream 223342 6342694 ~ 6342978 (+)
G50340 NA non-coding downstream 253080 6372432 ~ 6372911 (+)
G50342 NA non-coding downstream 255313 6374665 ~ 6375034 (+)
G50346 NA non-coding downstream 371305 6490657 ~ 6518591 (+)
G50362 NA non-coding downstream 510086 6629438 ~ 6629646 (+)
G50243 NA other upstream 366213 5738541 ~ 5742750 (+)
G50215 NA other upstream 512164 5596023 ~ 5596799 (+)
AMCG00008580 pnpla6,LOC106564686 other upstream 1536089 4561991 ~ 4572874 (+)
G49982 NA other upstream 1943480 4162058 ~ 4165483 (+)
G49980 NA other upstream 1948901 4156088 ~ 4160062 (+)
G50448 NA other downstream 838259 6957611 ~ 7018125 (+)
AMCG00008639 NA other downstream 1177534 7296886 ~ 7315850 (+)
G50583 NA other downstream 1814477 7933829 ~ 7939771 (+)
AMCG00008664 Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 other downstream 2159501 8278853 ~ 8324778 (+)
G50747 NA other downstream 2330814 8450166 ~ 8666548 (+)

Expression


Co-expression Network