AMCG00008618


Basic Information

Item Value
gene id AMCG00008618
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 6188494 ~ 6207751 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008618
GTTGCGGAAGTAATCAATGCAACGGAGTGCCCTGAGactgtgtttaattttttaaatgcagctttGGGCACCACCGAAGACCTGGCAAGCCTGTTAGGCCAAGAGAAAGCCAATGCAGCCAATTCTCTTCTGAAATTCTCAGAATCACTGGTGTCTACGTTAGTTGTGCCAACAGCAACACAGATGTATATAACCGTGAAAACAGATACCCTAGGTTCTGCAGCAGTAGCTTTTATGTCCTACACTGGAATGGAAACAATTCTGAATGCTGAATTCTTCAGCACTGAAAATTTGGCTGAGATGTTTTCAGACATTGTAGCAGCAACATTACCCAAAACAAAGATCACAAACCTCTCAGAGCCTGTCAATTTTACATTAAAGCACAAGATGACTAAGCCAGAAGATGGACTGCTGACCTGTGTCTATTGGAAAGAAACCCTGGAGAGGAAGTACTGGTCTGTTGAAGGCTGTACAGCAATATTGTCAGATGGAAATTACACTGTGTGCAGCTGTACCCATCTCTCCACCTTTGCTCTTATAATGCAAatcAGTGAACTATTACAGTTAATAAACAACATAGCAGTGGGAATAGGTCTGGTATTCCTCGCCTTATCCATTATTACATTCTGTTTCAGTAGTAGAAATACAAAGATAAACAATACCGCTCGCCTCAACCTGAGCATCTGCCTCTTCCTGGCTCACCTTCTGTTCATACTTGGGGcatcacacacagaaaacaagGCCATCCAGCTGTTCCTGCTGGTGAGGAACctgaagaaaatgaaagttATCCAGAGACAGGGACTGCATTATGGATATCTTCTGCTGATTGGCTATGGCACTCCAGCAGTCATTGTGGGCGTGTCTGCAGGAGTAGTCCCAGACGGTTATGGAGATAAAACAGCCAATTTCCTTCTCTTTGCCTCAATTATCTGGAATCTGCAGTCCACTATAGTTCACTTGAAGAGTGAAATCTCCCAATTGAAAGACACCCGGATAATggttttcaaattcattgtcCAGTTTGTCATATTGGGCTGCAGCTGGATACTTGGCTTCCTTCCAGAAGACCCTTTGCTCTCGTACCTGTTTCTAATCATCAACTCGCAGCAGGGTACTTTTATCTACATAGTTCACTGTCTACTGAACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008618 True 1152 mRNA 0.43 8 6188494 6207751

Neighbor

gene id symbol gene type direction distance location
AMCG00008617 NA coding upstream 69142 6108963 ~ 6119352 (+)
AMCG00008616 NA coding upstream 142624 6030847 ~ 6045870 (+)
AMCG00008604 NA coding upstream 305446 5881993 ~ 5883048 (+)
AMCG00008607 NA coding upstream 340813 5844345 ~ 5847681 (+)
AMCG00008605 NA coding upstream 411812 5766764 ~ 5776682 (+)
AMCG00008619 NA coding downstream 97975 6305726 ~ 6363030 (+)
AMCG00008626 tecr,LOC107573605,LOC107703756,LOC107694603 coding downstream 484994 6692745 ~ 6719091 (+)
AMCG00008629 NA coding downstream 539960 6747711 ~ 6748885 (+)
AMCG00008641 NA coding downstream 1146514 7354265 ~ 7354886 (+)
AMCG00008640 NA coding downstream 1164277 7372028 ~ 7376143 (+)
G50255 NA non-coding upstream 246967 5941207 ~ 5941527 (+)
G50214 NA non-coding upstream 593442 5594712 ~ 5595052 (+)
G50213 NA non-coding upstream 595563 5592436 ~ 5592931 (+)
G50212 NA non-coding upstream 597293 5586800 ~ 5591201 (+)
G50206 NA non-coding upstream 608472 5579222 ~ 5580022 (+)
G50336 LOC104962440 non-coding downstream 134943 6342694 ~ 6342978 (+)
G50340 NA non-coding downstream 164681 6372432 ~ 6372911 (+)
G50342 NA non-coding downstream 166914 6374665 ~ 6375034 (+)
G50346 NA non-coding downstream 282906 6490657 ~ 6518591 (+)
G50362 NA non-coding downstream 421687 6629438 ~ 6629646 (+)
G50243 NA other upstream 445744 5738541 ~ 5742750 (+)
G50215 NA other upstream 591695 5596023 ~ 5596799 (+)
AMCG00008580 pnpla6,LOC106564686 other upstream 1615620 4561991 ~ 4572874 (+)
G49982 NA other upstream 2023011 4162058 ~ 4165483 (+)
G49980 NA other upstream 2028432 4156088 ~ 4160062 (+)
G50448 NA other downstream 749860 6957611 ~ 7018125 (+)
AMCG00008639 NA other downstream 1089135 7296886 ~ 7315850 (+)
G50583 NA other downstream 1726078 7933829 ~ 7939771 (+)
AMCG00008664 Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 other downstream 2071102 8278853 ~ 8324778 (+)
G50747 NA other downstream 2242415 8450166 ~ 8666548 (+)

Expression


Co-expression Network