AMCG00008619


Basic Information

Item Value
gene id AMCG00008619
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 6305726 ~ 6363030 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008619
ATGGTGTCTGGGCCACTGACCTCTACTGATGGAGAAGAGGAAGAGCTGTTCCGCAGGGTGAACGGTATCCTGAACAAGCTGACCCCACAGACAGCCAAGGTAAGGCAGGTCCGACCAACGTGCCAGACTGAGCCCTGGCTAAATATCCAGCAACAAGCCTTCTTGAAGGAATGCTGCTTCACTCGGTGGTATAAAGTTACTTCTGTACCTGATGGAAGCCAGATGGGTAGCCAGATGGAACAGATCATCAAAGAGAGGAAGACCTCCTCTCGAATCCGCTTCTTGCTGCAGGACGTCTTGGACCTGAGAAGAGAAACCGACCTGCTGACACCCCCACCACAACAACAGGGATGCTGTACCCAATCAGCAGCAGAGATCAATGAATGTGTGGAAATCCCTGTACTCTGTGGtccaaatgcaaaatgtatcaaTGTCCCTGGAAGCTACAACTGCTCCTGTGCTCCTGGATTCAGTCCTCCAGCTGGGGTCACACTGACAAGTAATTCAACCCCGTGTGCAgACATCGATGACTGCCAGCAAGTTCCTCCTATCTGTGGTCCAAACTCAATTTGTAGCAACATAGTTGGGAGTTACAACTGCACTTGTGAAACTGGATATAAAACCAAAAGCATACAGAAGGAACCAATTACTCCATTAATGATAAATAAAGCCATTTCAGATATGGCCCAGGACAACATGAAGAGGGTAGAGCTTAGTCTACAGTGGCCCTTGCTCCTGGTGAAGACCCGGGGCCCCTGGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008619 True 762 mRNA 0.50 8 6305726 6363030

Neighbor

gene id symbol gene type direction distance location
AMCG00008618 NA coding upstream 97975 6188494 ~ 6207751 (+)
AMCG00008617 NA coding upstream 186374 6108963 ~ 6119352 (+)
AMCG00008616 NA coding upstream 259856 6030847 ~ 6045870 (+)
AMCG00008604 NA coding upstream 422678 5881993 ~ 5883048 (+)
AMCG00008607 NA coding upstream 458045 5844345 ~ 5847681 (+)
AMCG00008626 tecr,LOC107573605,LOC107703756,LOC107694603 coding downstream 329715 6692745 ~ 6719091 (+)
AMCG00008629 NA coding downstream 384681 6747711 ~ 6748885 (+)
AMCG00008641 NA coding downstream 991235 7354265 ~ 7354886 (+)
AMCG00008640 NA coding downstream 1008998 7372028 ~ 7376143 (+)
AMCG00008645 gdf11 coding downstream 1052769 7415799 ~ 7416230 (+)
G50255 NA non-coding upstream 364199 5941207 ~ 5941527 (+)
G50214 NA non-coding upstream 710674 5594712 ~ 5595052 (+)
G50213 NA non-coding upstream 712795 5592436 ~ 5592931 (+)
G50212 NA non-coding upstream 714525 5586800 ~ 5591201 (+)
G50206 NA non-coding upstream 725704 5579222 ~ 5580022 (+)
G50340 NA non-coding downstream 9402 6372432 ~ 6372911 (+)
G50342 NA non-coding downstream 11635 6374665 ~ 6375034 (+)
G50346 NA non-coding downstream 127627 6490657 ~ 6518591 (+)
G50362 NA non-coding downstream 266408 6629438 ~ 6629646 (+)
G50367 NA non-coding downstream 283920 6646950 ~ 6651339 (+)
G50243 NA other upstream 562976 5738541 ~ 5742750 (+)
G50215 NA other upstream 708927 5596023 ~ 5596799 (+)
AMCG00008580 pnpla6,LOC106564686 other upstream 1732852 4561991 ~ 4572874 (+)
G49982 NA other upstream 2140243 4162058 ~ 4165483 (+)
G49980 NA other upstream 2145664 4156088 ~ 4160062 (+)
G50448 NA other downstream 594581 6957611 ~ 7018125 (+)
AMCG00008639 NA other downstream 933856 7296886 ~ 7315850 (+)
G50583 NA other downstream 1570799 7933829 ~ 7939771 (+)
AMCG00008664 Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 other downstream 1915823 8278853 ~ 8324778 (+)
G50747 NA other downstream 2087136 8450166 ~ 8666548 (+)

Expression


Co-expression Network