AMCG00008621


Basic Information

Item Value
gene id AMCG00008621
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 6520531 ~ 6556299 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008621
ATTAATGAATGTAACGAAGTTGCTACAATTTGCGGTACTAATGCCCAATGTACCAACAACCCAGGGAGTTACAGCTGTTCCTGTAATACTGGATACCTCCCACCTCCTGGAGTCCCactcacaaataaaacacacccaTGTGCAGATATCGATGAATGTGATGATTTCCCACTAATCTGtgatgcaaatgcaaaatgtacaaaCTCTCCAGGGAGTTACAGCTGCTCCTGTGATACTGGATTCATCCCCCCCACTACAAACCTGTGTAAAGACATCAATGAGTGTATAGCTGTCGGCCTTTGTGGTCAAAATGCACAATGTATTAATACTGCTGGCAGCTACAATTGTTCCTGTGATAGCGGATACCGCCCACCATCTGGAGTGACACTAACGAATATATATTACCCCTGCAAAGAGATCAATGAATGTGCAGAAATCCCTGTACTCTGTGGtccaaatgcaaaatgtatcaaTGTCCCTGGAAGCTACAACTGCTCCTGTGCTCCTGGATTCAGTCCTCCAGCTGGGGTCACACTGACAAGCAATTCAACCCCATGTGCAGATATCGATGAGTGCCAACAAGCTCCTCATGTCTGTGGCCCAGATTCAATTTGTAGCAACATAGATGGGAGTTACAACTGCAATTGTGAAACTGGATATGAAGCCAAAAAACATGCTGTGATAAGCAACATATATCAATGCCAAGACATTGATGAGTGTGCAGTCGATTCTCAAATCTGTGGTCCACACGCCAACTGTACCAATACTAATGGCAGTTACCGTTGCATTTGTCTTAATGGATACAGCACTCCTCCAGGAGTCACACTGGCAAGTCGTTCACAACCCTGTGAAGATATAGATGAATGTTCAACGTTGCCCTTAGTTTGTGGGCCAAACACAGACTGCACCAACATCAATGGGAGTTACAATTGCTCCTGCTGGAAAGGATATAAGGCACCAAATGGAATAATACTGACCAATAATGAAAACCAATGCCAAGatATTGATGAATGTTCCAAAAATGCTTCACTCTGTGGATTAAATGCAGAGTGTTTCAACAAAGGTGGAGGATTTGACTGTGCATGTAAACAGGATTATCTTCCCTCCCCTGGACTTGTTTGGGAATTTGGAAAAACTCAGTGTAAATACATGCAATTGTGTGAAGCCAAACTGCCCAGATGTAAGTCAATAAAGAGGAAAGAAGGAATTATAGTGATGAAGTTTTGGGTGTTGAATACAAGTGCACTTTTGCACTTACACCACATACTGAGAGAAGTTACATTTGTGTGGAGTCTTATTAAGGAAGTTAGCTTGACAGCCATTGGACCTGACACAAACTTGACCACAATCCCTATTCTGGAAGCTAAAGCAAATGCTATGGAAATCAATCTGCTAAGCATTGCCAAGAACAATAATGGTTCTGCAGCAGCAATTTTCATTTCCTACTCTGATGGTGCTACAGATTCCTTATTACGTGCTGACTTTCTCAAGACTGAAAATGTAACCGAGATGTTTTCAGATGTTGTATCAGGAAGAATAGTCAAAACACCAATCACAAATCTCTCAGAGCCTGTTAATTTCaccttaaaacataaaatgtCAAAAGCAAATAGTGGGCTGATGACCTGTGTCTACTGGAAAGTATCAGGTGAAGAACAGTTTTGGTCTGTTGAAGGCTGCACAGCAACATTCTCCAACGCAACGTACACTGTGTGCAGCTGTACCCATCTCTCCACCTTTGCCCTGATAATGCAAACGGAGAGAGTGGTGCAGAATGATGACTTGTTGGACCAAATCAACAAAGTGCTTGTGATTTGTTCAATCATAGCCGGGGTCCTGCACTATCTGTTCCTGTCTGCCTTTGTGTGGATGTTGCTAGAATCGATTCAGCTGTTTTTGCTGGTGAGAAGTCTGACCAAAGTGAGGATCATCCATAGAGAAGGGCTCCGGCCTCTATACCTGCTGCTGATTGGGTACAGCATCCCTGTTGTCGTGGTGGGGGTGTCAGCAGGTCTGTTTCCCAGGGGATATGGAGATGACAAAATgataattattttcaaagctaTTGTCCAGTTTGTCATATTGGGCTGTGGCTGGTTACTGGGCTTCTTCCCAGGTACCCCTCTGTTGTCATACCTGTTTATCGTGCTCAACTCACAGCAGGGGACTTTTATCTTCATTGTTCACTGTCTGCTCAACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008621 True 2202 mRNA 0.43 15 6520531 6556299

Neighbor

gene id symbol gene type direction distance location
AMCG00008622 NA coding downstream 49798 6415940 ~ 6470733 (-)
AMCG00008620 NA coding downstream 123509 6391144 ~ 6397022 (-)
AMCG00008613 NA coding downstream 143875 6373524 ~ 6376656 (-)
AMCG00008615 NA coding downstream 188859 6321401 ~ 6331672 (-)
AMCG00008614 NA coding downstream 224692 6265998 ~ 6295839 (-)
AMCG00008625 NA coding upstream 34934 6591233 ~ 6600261 (-)
AMCG00008624 gipc1,LOC103468782,LOC102231162,LOC107711205,LOC106606841 coding upstream 95125 6651424 ~ 6659244 (-)
AMCG00008623 NA coding upstream 110564 6666863 ~ 6674622 (-)
AMCG00008628 ndufb7,ndub7,LOC106591659 coding upstream 159810 6716109 ~ 6719084 (-)
AMCG00008627 LOC108442223,LOC107594236,LOC107703743,LOC103374416,LOC100702196 coding upstream 164283 6720582 ~ 6742229 (-)
G50337 LOC104962440 non-coding downstream 177567 6342676 ~ 6342964 (-)
G50268 NA non-coding downstream 579004 5941195 ~ 5941527 (-)
G50126 NA non-coding downstream 1690910 4820240 ~ 4829621 (-)
G50020 NA non-coding downstream 2198643 4318783 ~ 4321888 (-)
G49984 NA non-coding downstream 2356881 4162175 ~ 4163650 (-)
G50361 NA non-coding upstream 69810 6626109 ~ 6627025 (-)
G50372 NA non-coding upstream 90712 6647011 ~ 6651343 (-)
G50381 tecr,LOC107703756,LOC107573605,LOC107594239,LOC107390378 non-coding upstream 136507 6692806 ~ 6706289 (-)
G50435 NA non-coding upstream 347778 6904077 ~ 6904389 (-)
G50437 NA non-coding upstream 349041 6905340 ~ 6905577 (-)
G50267 LOC107575789 other downstream 635081 5748890 ~ 5885450 (-)
AMCG00008608 NA other downstream 726536 5786620 ~ 5793995 (-)
AMCG00008609 NA other downstream 734203 5655689 ~ 5786328 (-)
AMCG00008602 NA other downstream 910202 5587075 ~ 5610329 (-)
AMCG00008554 NA other downstream 2649262 3430814 ~ 3871269 (-)
AMCG00008633 prkaca,LOC108429687 other upstream 282778 6839077 ~ 6885687 (-)
AMCG00008634 NA other upstream 364408 6920707 ~ 6933089 (-)
G50476 NA other upstream 391590 6947889 ~ 7151472 (-)
G50602 NA other upstream 1345036 7901335 ~ 7902606 (-)
G50656 NA other upstream 1578282 8134581 ~ 8135414 (-)

Expression


Co-expression Network