AMCG00008629


Basic Information

Item Value
gene id AMCG00008629
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 6747711 ~ 6748885 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008629
ATGTCAACTGTTTCATCCTCTGTGTCAGCATCTGCGAACCTAGAGGCTGAGTTGAACTGCTCGGTCTGCTTGAGCATCTACAAGGACCCGGTGTTGCTGTGCTGTGGGCACAACTTCTGCAAAAGCTGTCTGGGTAGAGTGTGGGACAACCAGAAACCTGGCAAAGGTTACTCCTGCCCAGAGTGCAGGACACTGTATCAGCAGTACCCTGTCCCACAGAGAAACATCAAACTTGCCAACATTATTGACTGTTTCAAGGCTACCAGGGATTCCTCAGAGCCTTTAGAATCTGAGGTGCCATTGCCTGACCAAGGAGGAGCGATAGACGTTTCTAGGAAGGATACACAAGGAAAGATGCCTCTGATGAACCGCTGTCCAGAACATGGGAAACCTTTGGAGTATTTTTGCCGCCAACATGGGTTATGCTTGTGCGAGACTTGCCGGGAGGGTCACCAGAACCACAACCTGCAAGAGCTGAAGAAAGCAGTAGCAGAGAAGAGAGCCACCTTGACAGAGGAGATTGAGAGGCTGGTGCAGGCACAGGAGCTGCTACAGGAAATGGTCAGTTGGCTGCAGGATGCCAGGATGCAGGTGAAGGCTGACCGCAGCAGGCTGAAGGATCAAATTTCTAGGTTATTTGAGGAGATCAAAGAGATGTTCAAGGCTGAGGAATGCAGTATTCTGGATTCTATCACAGCAGAAGAGAACATTCAAGACTCCCAGCTGGAGTCTCGgatcagagagacagagaccaaGTGGGAGATAGCTGAGCAGCTCCTCCAGGAAGCATGGGCGCTGGAGAAAGAAAGCATGGAAGCCTGGGAATTCTTGGGGTCCTTTCCAAAGACACTGGATATGGTACTGAAGGCTGATATCCATGTCCAAGCATGCACTTTGCACAAATGGGAGATGGACAGGGCCTCGGTCAGTCAGGGATCTCTCAACTGCAAACTGGGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008629 True 960 mRNA 0.51 2 6747711 6748885

Neighbor

gene id symbol gene type direction distance location
AMCG00008626 tecr,LOC107573605,LOC107703756,LOC107694603 coding upstream 28620 6692745 ~ 6719091 (+)
AMCG00008619 NA coding upstream 384681 6305726 ~ 6363030 (+)
AMCG00008618 NA coding upstream 539960 6188494 ~ 6207751 (+)
AMCG00008617 NA coding upstream 628359 6108963 ~ 6119352 (+)
AMCG00008616 NA coding upstream 701841 6030847 ~ 6045870 (+)
AMCG00008641 NA coding downstream 605380 7354265 ~ 7354886 (+)
AMCG00008640 NA coding downstream 623143 7372028 ~ 7376143 (+)
AMCG00008645 gdf11 coding downstream 666914 7415799 ~ 7416230 (+)
AMCG00008643 gdf11,LOC108254821,LOC106513268,LOC107562248,LOC107573429,LOC107683628,LOC107385665 coding downstream 738285 7487170 ~ 7496005 (+)
AMCG00008644 NA coding downstream 794835 7543720 ~ 7552782 (+)
G50367 NA non-coding upstream 96372 6646950 ~ 6651339 (+)
G50362 NA non-coding upstream 118065 6629438 ~ 6629646 (+)
G50346 NA non-coding upstream 229120 6490657 ~ 6518591 (+)
G50342 NA non-coding upstream 372677 6374665 ~ 6375034 (+)
G50340 NA non-coding upstream 374800 6372432 ~ 6372911 (+)
G50450 NA non-coding downstream 273576 7022461 ~ 7166940 (+)
G50451 NA non-coding downstream 292036 7040921 ~ 7050362 (+)
G50458 NA non-coding downstream 463861 7212746 ~ 7219181 (+)
G50459 NA non-coding downstream 471855 7220740 ~ 7222856 (+)
G50461 NA non-coding downstream 484535 7233420 ~ 7248042 (+)
G50243 NA other upstream 1004961 5738541 ~ 5742750 (+)
G50215 NA other upstream 1150912 5596023 ~ 5596799 (+)
AMCG00008580 pnpla6,LOC106564686 other upstream 2174837 4561991 ~ 4572874 (+)
G49982 NA other upstream 2582228 4162058 ~ 4165483 (+)
G49980 NA other upstream 2587649 4156088 ~ 4160062 (+)
G50448 NA other downstream 208726 6957611 ~ 7018125 (+)
AMCG00008639 NA other downstream 548001 7296886 ~ 7315850 (+)
G50583 NA other downstream 1184944 7933829 ~ 7939771 (+)
AMCG00008664 Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 other downstream 1529968 8278853 ~ 8324778 (+)
G50747 NA other downstream 1701281 8450166 ~ 8666548 (+)

Expression


Co-expression Network