AMCG00008631 (LOC107580959)


Basic Information

Item Value
gene id AMCG00008631
gene name LOC107580959
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 6798763 ~ 6804508 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008631
ATGGAGGTGGGTGTTGCATCCTGTCTGCTCACACCCACAGCGTCTCCGGGAGACACAGACGTGAGCGAGGAGAGAGTTCTGAATGGAGAGATCTTTGTGAAGTCTGAGAAGCCCAGTGTGGACCCAATGGACTGGACAGTGTCGGACGTGGTCAGCTATTTCACGGCGGCTGGATTTGGGGAGCAGGCCAGCGCTTTCAGGATGCAGGAAATTGATGGAAAATCCCTCCTTCTCATGCAGCGGAATGATGTGCTGACAGGGCTGTCAATCAGACTTGGCCCTGCCCTCAAGATCTATGAATATCATGTCAAGGAGCTCCAGAGGACCCACTTCCAGGATGACAGCGCACTGTGCTGA

Function

NR:

description
PREDICTED: sterile alpha motif domain-containing protein 13-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008631 True 357 mRNA 0.54 3 6798763 6804508

Neighbor

gene id symbol gene type direction distance location
AMCG00008627 LOC108442223,LOC107594236,LOC107703743,LOC103374416,LOC100702196 coding downstream 56534 6720582 ~ 6742229 (-)
AMCG00008628 ndufb7,ndub7,LOC106591659 coding downstream 79679 6716109 ~ 6719084 (-)
AMCG00008623 NA coding downstream 124141 6666863 ~ 6674622 (-)
AMCG00008624 gipc1,LOC103468782,LOC102231162,LOC107711205,LOC106606841 coding downstream 139519 6651424 ~ 6659244 (-)
AMCG00008625 NA coding downstream 198502 6591233 ~ 6600261 (-)
AMCG00008630 samd1,LOC108442215,LOC100700176 coding upstream 15456 6819964 ~ 6829699 (-)
AMCG00008632 asf1b,asf1bb,LOC103026007,LOC107599302,LOC108429686,LOC101069596 coding upstream 104266 6908774 ~ 6915444 (-)
AMCG00008635 NA coding upstream 195046 6999554 ~ 7009561 (-)
AMCG00008636 NA coding upstream 409161 7213669 ~ 7276093 (-)
AMCG00008637 NA coding upstream 511618 7316126 ~ 7337849 (-)
G50381 tecr,LOC107703756,LOC107573605,LOC107594239,LOC107390378 non-coding downstream 92474 6692806 ~ 6706289 (-)
G50372 NA non-coding downstream 147420 6647011 ~ 6651343 (-)
G50361 NA non-coding downstream 171738 6626109 ~ 6627025 (-)
G50337 LOC104962440 non-coding downstream 455799 6342676 ~ 6342964 (-)
G50268 NA non-coding downstream 857236 5941195 ~ 5941527 (-)
G50435 NA non-coding upstream 99569 6904077 ~ 6904389 (-)
G50437 NA non-coding upstream 100832 6905340 ~ 6905577 (-)
G50496 NA non-coding upstream 562117 7366625 ~ 7366930 (-)
G50514 NA non-coding upstream 574530 7379038 ~ 7379487 (-)
G50557 NA non-coding upstream 849572 7654080 ~ 7657391 (-)
G50267 LOC107575789 other downstream 913313 5748890 ~ 5885450 (-)
AMCG00008608 NA other downstream 1004768 5786620 ~ 5793995 (-)
AMCG00008609 NA other downstream 1012435 5655689 ~ 5786328 (-)
AMCG00008602 NA other downstream 1188434 5587075 ~ 5610329 (-)
AMCG00008554 NA other downstream 2927494 3430814 ~ 3871269 (-)
AMCG00008633 prkaca,LOC108429687 other upstream 34569 6839077 ~ 6885687 (-)
AMCG00008634 NA other upstream 116199 6920707 ~ 6933089 (-)
G50476 NA other upstream 143381 6947889 ~ 7151472 (-)
G50602 NA other upstream 1096827 7901335 ~ 7902606 (-)
G50656 NA other upstream 1330073 8134581 ~ 8135414 (-)

Expression


Co-expression Network