AMCG00008640


Basic Information

Item Value
gene id AMCG00008640
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 7372028 ~ 7376143 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008640
GCCCTCTTACTCACAAGACTTactaccaaaaaaacaaaagtcttatGAGCAAACGGCAGCCTCCCTTTGGTTTATTACCTTGGAATAACAGCAGCACAAACTGGATTTGGTGTTATAATAtgcaatacaatgtttttttctgatgtgGTTGTTAGGGAGCGATTTTACTGTAACTGCAGATCGGGGGAGCATTGTTGTCGCTTTGAACGCACCTGCAGTGACTGGTAGCATTACTATGCCTGTGAACATTAATAAGTCAGAATTGTCACATCTTGAGCAATTTATCGAGGATCTCGTGAAGAAAAATGACGAATTACATAATCGTGATCAGCAAGAGCTCAAAAAGGATATGGATATGATAAGAAACACCCTGCTGGGAATTGCTGGTGTGCTCTGTGTCATAGCCATTGAAGTTGCAGTATTTGCCAGTATGTGGCtaaagaaaaagggaaacaaagggcGATCATGTCCACAATATGTACCAGATtttgaaactgaagaaaatacTGCAGGAACAGATGAGGAAATGGAGCCTGAATATGTCATGGCTGAAGGCTCAGCAAGTGGCCAGTATGCTTCATACAGATAGAGGGAGCAGTGTAATGATGACCATTCTACAGATGCCTACTGACAGGCGGAGTTTGTGAGGCTAACAACTTGACCAGTGCTCTTCTCAGCAAAACAGTATCACAGATACTAGGCGTCAGATTCTGgtgcatattgttttaatgcttaAACTATATATCACAGccattatattatgttatagTTCTCACTCTGAATAGAAAACAACTGTAGTGTGATTATACAGAAAGGTATTCTACTTGATCATTTCTATTTACCAGTCTGCAACATGTAATTAGTCACGTCTGGCAGGTGCACGGTTGTCTGATTTAATTTGGTAAATTAAATTTCTAACTgctgcaaatatattttaaaaatgtataacagaacaaaaatgctAGATTTGCTAATTGTCTGACCCACTCAAATTTCATGAAACATTTCCTGGAAAGTTAATAACATTTCCAAAAGGGTTTCCACCCATTTGCCACCCAATTTAGGtctacattttgcatttcaactACCTTGTCATTCCAGCACTGTGCCACAGGATGTCACTGATAATACAGTTCTTTCaatctttcattcatttaattagttCTATAGTTCTTTTCAATATAGTTCAATCATtctttttcttagatttaatGTACCTATGGTATTTGCtaataaagaaaacagcaaCATAAAATTATCTTAAGGGCTTTTATCAATgattctgattttttttgttctgttggttttgttttcagattccCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008640 True 1324 mRNA 0.37 6 7372028 7376143

Neighbor

gene id symbol gene type direction distance location
AMCG00008641 NA coding upstream 17142 7354265 ~ 7354886 (+)
AMCG00008629 NA coding upstream 623143 6747711 ~ 6748885 (+)
AMCG00008626 tecr,LOC107573605,LOC107703756,LOC107694603 coding upstream 652937 6692745 ~ 6719091 (+)
AMCG00008619 NA coding upstream 1008998 6305726 ~ 6363030 (+)
AMCG00008618 NA coding upstream 1164277 6188494 ~ 6207751 (+)
AMCG00008645 gdf11 coding downstream 39656 7415799 ~ 7416230 (+)
AMCG00008643 gdf11,LOC108254821,LOC106513268,LOC107562248,LOC107573429,LOC107683628,LOC107385665 coding downstream 111027 7487170 ~ 7496005 (+)
AMCG00008644 NA coding downstream 167577 7543720 ~ 7552782 (+)
AMCG00008648 NA coding downstream 246487 7622630 ~ 7669344 (+)
AMCG00008649 LOC106565510,LOC106583272,LOC108424584 coding downstream 346098 7722241 ~ 7725184 (+)
G50461 NA non-coding upstream 123986 7233420 ~ 7248042 (+)
G50459 NA non-coding upstream 149172 7220740 ~ 7222856 (+)
G50458 NA non-coding upstream 152847 7212746 ~ 7219181 (+)
G50450 NA non-coding upstream 205088 7022461 ~ 7166940 (+)
G50506 NA non-coding downstream 2905 7379048 ~ 7379506 (+)
G50534 NA non-coding downstream 156831 7532974 ~ 7542850 (+)
G50546 NA non-coding downstream 297998 7674141 ~ 7676185 (+)
G50561 NA non-coding downstream 316793 7692936 ~ 7828902 (+)
G50563 NA non-coding downstream 363052 7739195 ~ 7740429 (+)
AMCG00008639 NA other upstream 56178 7296886 ~ 7315850 (+)
G50448 NA other upstream 353903 6957611 ~ 7018125 (+)
G50243 NA other upstream 1629278 5738541 ~ 5742750 (+)
G50215 NA other upstream 1775229 5596023 ~ 5596799 (+)
AMCG00008580 pnpla6,LOC106564686 other upstream 2799154 4561991 ~ 4572874 (+)
G50583 NA other downstream 557686 7933829 ~ 7939771 (+)
AMCG00008664 Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 other downstream 902710 8278853 ~ 8324778 (+)
G50747 NA other downstream 1074023 8450166 ~ 8666548 (+)
G50900 rnf41,LOC107701697,LOC107756409,LOC107723732,LOC107671855 other downstream 1705684 9081827 ~ 9087967 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other downstream 1740532 9116675 ~ 9122812 (+)

Expression


Co-expression Network