AMCG00008675


Basic Information

Item Value
gene id AMCG00008675
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 8680333 ~ 8693830 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008675
ACTGCCATGGGGCTGCTGGATAGACACCCCCAGGTGTGCATGGGCAGGGTAGGCGTGCTGGGCCGGTGCTTGGGGGGGTACCTTGCCATGCGCATCGCCATGGAGATGCCCAATGTCAATCCCAGGTGTGTGGTCGGAATCTCCACTTCGGCAGGACTGAAGATCAATATGACCAGGGAGCAGACGAACGATTTTATGAAAGAgaaCCAGAAGTTCTGGTATTTAAATGAACAGGGATACGTCATCATCCGAGGAATGTCTCTGCCCAGCAACGTTCCACCCGAGTACAAACTAAAGATCGAAGAGAGGCTGGGTGCAGTGGGGAAGTCTGGCCTGTTGACCCGGATCCAGTACCCGGGCGCTGGGCACCTGATTGAGCCACCTTACACTCCCAtGATCCCTCTTTGGGGTGGTCAGCTCCAGCCCCACTCTGTGGCCCAGGAGGATGCCTGGAAGAGGATTCTGGTATTTCTAGATCATCACCTGAGGGCAGACTACCCTTTTAAAGAGCCAGAAGATTCCCCAGCTGTCATCCCTCTCACACCGAAACGGGAGCTCTAATGGCTGGGGAGCTGAGGAAAGGGGGGCAGCTCCTCTAAATGAGAGATGCATGTGGAACCACATCACAGATCTTCTCTAGCAGACTTGTGGTTTCTGAGGAACATCTACTGCAGGAGTCtccaaccctggccctggaCAGCCCCAATCCAGCCTGTTTAATAGGTCAACTTTGCTTCATCATTATCTAAAggcattcaaatatttgaacCAGGACAGCTGAGCAATTGGTTTGGATTATCATGCACTGAGCAATGAGAAATCATTTTCACAATTATGTTAAGAATTTATAAGTgatcaattaaatgtttgtagTGTACCTTTTGTCAAAATAACAGCAGATGCCACATATAGCATTATTGTTGTAAAGTAACACATCTAGTAATGTTTGTTGAATAGGCTGTTTGAATTTAGTCCAGAAGTGCAAGTGAAAAGTGTACTTAATGAAATGCACACTTCCAACATGTTCCATCAATCAGGTTTGGGTTCAAAGTAGGAGTTAATTTAAGTAATCCATTATCATCAATAACATAATATTGCTAGTTATGCAAATAAGTCAAACGTGTTGATGCATGTATGTAATGCAGTAGTACAATTATTGACTGTTTTAAAGaatgcttaaaataaagtttaaatgtatata

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008675 True 1201 mRNA 0.45 6 8680333 8693830

Neighbor

gene id symbol gene type direction distance location
AMCG00008678 NA coding upstream 10604 8668601 ~ 8669729 (+)
AMCG00008670 rab5b,rab5c,LOC108245972,LOC103393176,LOC107381932 coding upstream 296370 8369707 ~ 8383963 (+)
AMCG00008671 cdk2,LOC107570445,LOC107683630 coding upstream 315790 8357428 ~ 8364543 (+)
AMCG00008665 LOC103367933,LOC106456382,LOC108433351,LOC107714908 coding upstream 386816 8276771 ~ 8293517 (+)
AMCG00008663 LOC107714908 coding upstream 406615 8244041 ~ 8273718 (+)
AMCG00008677 NA coding downstream 1012 8694842 ~ 8699781 (+)
AMCG00008676 NA coding downstream 30243 8724073 ~ 8727731 (+)
AMCG00008679 NA coding downstream 70501 8764331 ~ 8771848 (+)
AMCG00008684 ormdl2,LOC104952346 coding downstream 86923 8780753 ~ 8784879 (+)
AMCG00008683 LOC106581923 coding downstream 132217 8826047 ~ 8840517 (+)
G50757 NA non-coding upstream 91205 8572729 ~ 8589128 (+)
G50698 NA non-coding upstream 411007 8269007 ~ 8269326 (+)
G50692 NA non-coding upstream 433501 8246577 ~ 8246832 (+)
G50668 NA non-coding upstream 489548 8189825 ~ 8190785 (+)
G50627 NA non-coding upstream 605329 8068760 ~ 8075004 (+)
G50823 NA non-coding downstream 109376 8803206 ~ 8809391 (+)
G50878 LOC100846954 non-coding downstream 300706 8994536 ~ 8994903 (+)
G50929 NA non-coding downstream 497947 9191777 ~ 9192377 (+)
G50930 NA non-coding downstream 498700 9192530 ~ 9192919 (+)
G50931 NA non-coding downstream 499185 9193015 ~ 9193685 (+)
G50747 NA other upstream 13785 8450166 ~ 8666548 (+)
AMCG00008664 Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 other upstream 355555 8278853 ~ 8324778 (+)
G50583 NA other upstream 740562 7933829 ~ 7939771 (+)
AMCG00008639 NA other upstream 1364483 7296886 ~ 7315850 (+)
G50448 NA other upstream 1662208 6957611 ~ 7018125 (+)
G50900 rnf41,LOC107701697,LOC107756409,LOC107723732,LOC107671855 other downstream 387997 9081827 ~ 9087967 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other downstream 422845 9116675 ~ 9122812 (+)
AMCG00008710 NA other downstream 616256 9310086 ~ 9316151 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other downstream 661262 9355092 ~ 9379579 (+)
AMCG00008725 NA other downstream 1221664 9915494 ~ 9937752 (+)

Expression


Co-expression Network