AMCG00008676


Basic Information

Item Value
gene id AMCG00008676
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 8724073 ~ 8727731 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008676
aTGGCAGGGGTGCTTCGAGTGCTGCTCAATGTTGCGGAGAAAGCGGCCAACATTGCCCGTGTCTGCAGACAGGAGGCAACGCTGTTCAAGCTGCTGGTCCAGGAGAAAACCGGGTCTGACAAGAACAAGAAATTCGTTCAGGACTTCAAGACGCTGGCCGATGTGGTCATACAGGAGATGATCAGACATGACGTGGGGAGAGAGTTCCCAGAGCTGGTGGGCTTCATCAGAGGAGAGGAGTCCAACAACACACAGGAGGAGACGGCCGCCCTGCTCAGCGCCGTGCTGAACGGTAACAAGATGGCCGCCTCATTGTTGGCCCAGGCCATCCACCAGGACCTGCAGGTCACTGACCCTGTCGATGCCACCAGTCAATACGTGGAGGGACGACAGGATGTGGAGGCCAATAATGGAATGTACCCAGGGGGGTTACAGTGTTCCCTGGTCCTAATCGGAGTCTACCTGAGGGCCAACGGAGAGCCCATCATGGGAGTGATCAACCAGCCCTTCGCACACCGAGATCCAGGGGGGAAGGGCTGGAGTGGACAGTACTTCTGGGGCGTCTCCTACGAGAACCTCAATGTCTCCTCGCTGCCCAGACCAGCGCCGCCTCTGGTGACTGAGGAGCAGCCGCTGACTGTGGTGCTCAGCTCCAGCGAGAAGGACAGTGTAAAGCAAGTTCTGACACCCCTGTGTGGTGGGGGGCCAAGATATGCCTCGGGAGCCGGCTACAAATTCTTGTGTGTGGTTCTGGGACTGGTGGACGCCTATGTGGTCTCGGAGGGCAGCACCTACAAGTGGGACTCCTGCGCCCCCCATGCCATCCTCAGGGCGCTAGGTGGGGGAGTTGCTGACCTGGGGCAATGCCAGAGCCTTCCTGAAAACGGGGGGGTGCCAGAACTGAAGTACCACCAGCCCAGGGCAGGGTGCCAGGGGTCAGACCAGTGGGCCAATCAATCAGGACTGGTAGCTTTCTTGGACCCTGAAAAACTGAAACTTGTGATCAGGGCTCTAAACCTCTGA

Function

GO: NA

KEGG:

id description
K01107 INPP1; inositol polyphosphate 1-phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008676 True 1023 mRNA 0.58 5 8724073 8727731

Neighbor

gene id symbol gene type direction distance location
AMCG00008677 NA coding upstream 24292 8694842 ~ 8699781 (+)
AMCG00008675 NA coding upstream 30243 8680333 ~ 8693830 (+)
AMCG00008678 NA coding upstream 54344 8668601 ~ 8669729 (+)
AMCG00008670 rab5b,rab5c,LOC108245972,LOC103393176,LOC107381932 coding upstream 340110 8369707 ~ 8383963 (+)
AMCG00008671 cdk2,LOC107570445,LOC107683630 coding upstream 359530 8357428 ~ 8364543 (+)
AMCG00008679 NA coding downstream 36600 8764331 ~ 8771848 (+)
AMCG00008684 ormdl2,LOC104952346 coding downstream 53022 8780753 ~ 8784879 (+)
AMCG00008683 LOC106581923 coding downstream 98316 8826047 ~ 8840517 (+)
AMCG00008685 NA coding downstream 138548 8866279 ~ 8881168 (+)
AMCG00008688 NA coding downstream 175483 8903214 ~ 8913342 (+)
G50757 NA non-coding upstream 134945 8572729 ~ 8589128 (+)
G50698 NA non-coding upstream 454747 8269007 ~ 8269326 (+)
G50692 NA non-coding upstream 477241 8246577 ~ 8246832 (+)
G50668 NA non-coding upstream 533288 8189825 ~ 8190785 (+)
G50627 NA non-coding upstream 649069 8068760 ~ 8075004 (+)
G50823 NA non-coding downstream 75475 8803206 ~ 8809391 (+)
G50878 LOC100846954 non-coding downstream 266805 8994536 ~ 8994903 (+)
G50929 NA non-coding downstream 464046 9191777 ~ 9192377 (+)
G50930 NA non-coding downstream 464799 9192530 ~ 9192919 (+)
G50931 NA non-coding downstream 465284 9193015 ~ 9193685 (+)
G50747 NA other upstream 57525 8450166 ~ 8666548 (+)
AMCG00008664 Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 other upstream 399295 8278853 ~ 8324778 (+)
G50583 NA other upstream 784302 7933829 ~ 7939771 (+)
AMCG00008639 NA other upstream 1408223 7296886 ~ 7315850 (+)
G50448 NA other upstream 1705948 6957611 ~ 7018125 (+)
G50900 rnf41,LOC107701697,LOC107756409,LOC107723732,LOC107671855 other downstream 354096 9081827 ~ 9087967 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other downstream 388944 9116675 ~ 9122812 (+)
AMCG00008710 NA other downstream 582355 9310086 ~ 9316151 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other downstream 627361 9355092 ~ 9379579 (+)
AMCG00008725 NA other downstream 1187763 9915494 ~ 9937752 (+)

Expression


Co-expression Network