AMCG00008678


Basic Information

Item Value
gene id AMCG00008678
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 8668601 ~ 8669729 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008678
CTCAGGAAAAAGAATGCGGAGACTCCTTTCATAGTGGAGGTATCCGTGCTCAGCGGACATGTTGGCTCCTCATGGCAGCCCTCCGGGGAGTCATTTGGTCAGGGGCTGCAGGAGGGGGCAGTGCTGGCTGCAGTGAATGTGGAGCGCTGGTACATGGCACCAGGAGTGCGCAGGGTGGAGGTGCGAGAGCAGGGGGTGGTGGGCACCCTCTTCTTGCCTGCAGGTCCAGGACCATTCCCTGCTGTGCTGGACATATGGGGGATGGGTGGGGGACTGAATGAGTACCGATCTGCCCTCCTGGCTTCTCACGGATTCGTCTCTCTAGCCCTGGCATACTGTGGGCACAGGGAGCTGCCGGAGCCACTGCACACAGTGAATGTCGGGGATCGGTACTTCGAGGTAAGTGAGAGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008678 True 414 mRNA 0.60 2 8668601 8669729

Neighbor

gene id symbol gene type direction distance location
AMCG00008670 rab5b,rab5c,LOC108245972,LOC103393176,LOC107381932 coding upstream 284638 8369707 ~ 8383963 (+)
AMCG00008671 cdk2,LOC107570445,LOC107683630 coding upstream 304058 8357428 ~ 8364543 (+)
AMCG00008665 LOC103367933,LOC106456382,LOC108433351,LOC107714908 coding upstream 375084 8276771 ~ 8293517 (+)
AMCG00008663 LOC107714908 coding upstream 394883 8244041 ~ 8273718 (+)
AMCG00008656 NA coding upstream 530540 8125999 ~ 8138061 (+)
AMCG00008675 NA coding downstream 10604 8680333 ~ 8693830 (+)
AMCG00008677 NA coding downstream 25113 8694842 ~ 8699781 (+)
AMCG00008676 NA coding downstream 54344 8724073 ~ 8727731 (+)
AMCG00008679 NA coding downstream 94602 8764331 ~ 8771848 (+)
AMCG00008684 ormdl2,LOC104952346 coding downstream 111024 8780753 ~ 8784879 (+)
G50757 NA non-coding upstream 79473 8572729 ~ 8589128 (+)
G50698 NA non-coding upstream 399275 8269007 ~ 8269326 (+)
G50692 NA non-coding upstream 421769 8246577 ~ 8246832 (+)
G50668 NA non-coding upstream 477816 8189825 ~ 8190785 (+)
G50627 NA non-coding upstream 593597 8068760 ~ 8075004 (+)
G50823 NA non-coding downstream 133477 8803206 ~ 8809391 (+)
G50878 LOC100846954 non-coding downstream 324807 8994536 ~ 8994903 (+)
G50929 NA non-coding downstream 522048 9191777 ~ 9192377 (+)
G50930 NA non-coding downstream 522801 9192530 ~ 9192919 (+)
G50931 NA non-coding downstream 523286 9193015 ~ 9193685 (+)
G50747 NA other upstream 2053 8450166 ~ 8666548 (+)
AMCG00008664 Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 other upstream 343823 8278853 ~ 8324778 (+)
G50583 NA other upstream 728830 7933829 ~ 7939771 (+)
AMCG00008639 NA other upstream 1352751 7296886 ~ 7315850 (+)
G50448 NA other upstream 1650476 6957611 ~ 7018125 (+)
G50900 rnf41,LOC107701697,LOC107756409,LOC107723732,LOC107671855 other downstream 412098 9081827 ~ 9087967 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other downstream 446946 9116675 ~ 9122812 (+)
AMCG00008710 NA other downstream 640357 9310086 ~ 9316151 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other downstream 685363 9355092 ~ 9379579 (+)
AMCG00008725 NA other downstream 1245765 9915494 ~ 9937752 (+)

Expression


Co-expression Network