AMCG00008689


Basic Information

Item Value
gene id AMCG00008689
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 8882494 ~ 8892523 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008689
CTGTGCAATACTTTAGGTACAGAAGTACTGAGTGACGGGTTTTAGCCAGAACAAAGTTTAACCCCACCCAAATATAGTCAGTATGCTTAATGTTAGAGTTAGGTCTATACAGTAGTATCGGGGAGGGGCGGCCAAATACAATCAAATCATCCAAACTCGACTATTTTGTCTGGTTGCTTGCAAAGTTACGGTACATGCCCTGAAGGAAAatactgtagaaaaaaaaaacaaaaaaaacaactaaaaatagaaaaaagtgAACTGTGTGAGTGCCGTCCCCCTCTGAGTTCCTGTTTTGCTGGTTTCAATAACCAGAAACATTTGGAAAGTCCGCCGCCGCGGCCCCGTTAAAGACAACGTCCTCTTTTCGGACGACGTGACCAGAGCAGACAGCGGTCTTTCTCAGGGAAGCTCCACTCAGCCGCaccgggagagagggagacgacGAGGCCGAGGCcgaggacaggacaggacaggacccGGGACCCGCCGGTGCCCAGCGCTGCGCCGCTCCATGCGCCCGCACCCTGCGGGAGAGACGCTTCGGCTTCACCCGTCACTTCTCTATTCGCCCGCTGAACCGAAAACAACGACAAAGCGACCAAAAACTAAAGGTCAGACACCAGCCCAGCCGAGCGGAAAGTAGAAGTGTAAACGCGCAGACTTGTTTTGTTGCTGGTCTCAGCTGTTGGAGCGTCTTGTGAAAAGCAGTTTCCCGGCGGCAGACAGGCTGTGCGGGCTCTGATGATCCAAACAGCCCTGCTTGGATTTGCGGCCTGTGTCTGAAGCCCCGCAGCCCTGCTCTGGATACCTGAAATCACTGTGCAGAGGTGTTCTTGAGTGACTGGGGCTGTAACCGGAGAGGAGAGGGCCGGGGAGAACGGGGGACTGCAATGGAAGAGGCCTACGCTGAACTGTATAAACAATTCATTGAACTTCGCAACCTCTGCCTGAAGCAAGCCGCCCTCCTCCACAGACTCACAGCCGgcaaagacagaaacagagCCCCGGCCTCAGCCCACCCTCCTGACCCTCTGCCCTTTGCCTCCATCCCTGTCCAGTGCACTGACCAGGCCAGGCTTCTGGCACAGCCACCCTTCCCCTACCCAAATGCTGCTCCACCCCCTCTGGCGCCCCCTGCAGCCCAGGCAGTGTGGCACATGCAGGCCAGCCAATCTACAGTGGATGATTTGGGTCACCTTGTGGACGGCGTGGACAGATTACAAGTCCGTGTCGGGGGGCAGAGGCAGACCGCTCCTTCCCATGTGATGAATGCGGCCGAGGACCTGACTAGGGTGTTGGCTCCCCCTTGTGGCTCCGAGAGGTTACTGCCGCCTGGCCCCTCTCCGCAGCAGTACAGCGCCACAGCGGGGAGCTCCCAGAACAAGGAGGGGACCACCAACCATAAGATGCCCTGGCTCTCCAGCTCGTTCCTGGACAGCGACCTGCTGAGCCGCGGGGGCTTCCTGCTGTCGGAGGCCACCCTACACTCCCAGGTGTGCGAGTTCTGTCAGGCCGTGTTCCCAAGCGACACCACCACCCGCGGCGAGTTCCTGCGCCACCTCACCGCCCATGTCACCTGACCACTGGAGAAAAAGGGGCCCCGGGGGCCCCAGCCAGCCCCACCCAGCCCCTCTCAACACACAGGACGGATCCCTGCATCAGAGCGATCGTTAACATAGCAAGAGATTGGGGGCACTGGGGGCGGCTGTATTGAGTGGGGGACTACAAATAGTGGCCAGCGGTCGTTCTGCTGCTTCCTGAGGACTGTGCTTGCTTGAGTACCTTCACAGATGGCACTTAACGAACACTCCTCAATACGCCGGAGCCCCATGGCTTGCAgtgcactgacacactgaatcCCGATTTCTCTTTGCTGACCTACTGACCTTCACCTCCCTCTACTGAGTGTGTAAACTGCCTGGACTAAAGCTGTAGTAAATGATCCAGCCCTGCTGAGTGTAGCTCTGCACCACTGTCTGCAAATGTAATGCGTTACCTTGGACCCCAGACAACAgccacacacaatcacaatataaaatctatttaaaaaaactaaagcgTGTGGGAGGTCtgtctctgcatttcttttgcGTAGATTTATAGCAAGTGTTGACCTAACTGACGCTTTTAGTCACAGAATATGTAGAGCAGTGAGTGACTGTTAGTTCTGAAAACGAATCTGATCGGGTCTACTTTTCTGTCTAAGAAAATGTTCTTGCCTCGCAGACTTTCTGGTATTGAACGCCGTGATGTCCAAATATGTTCCACATTAAACCACACTGAGCCCCACTTCTAAACATCCTCCTCCAAACGCCATTCAGTCCATTCATACCCAATTATAAGGCTTTAAGTCTAGGAGGGCTTACAAGTGTTTTCTTCTTGATTTTCGAGAAGCGAAGTACTCGATTATATCACCGAAATCCAAGGTCCGCAGAATGTCACTTTCAAGGGACATCAGTGAGGTGATCCAGTCTGTCTGCCCATTGTAGAGGCATCCTACTCACCAGTCCAGGTTTAGAAAAAGAGCATTTCCAGAGGCCCTCATAAGTGGGAAGTTAGATATATGTGAAATGCAATGTCCACATATGGGAACACAGATTGCAGCATCTTTTACGCAATAACTGAAGCAAGGCTCTTGCACTCTGGTTCTCCTCATTCACAGATTCTTTAAACTGAGAAATCCTCTTGTAAATCAGTGTAGTTTTATCTGAAGCCAGACAGCACAGGATCGAAATTCTTGAGATAAGAGTTGATAAATATTATTCAGAAATCCAAAACTCATGTCCAGTTCCTGATATGATGCATATCTCCTATATAACTCAGCGACAAGTTTgtcaataattacattaaaaacaccaaCTTCAAATTTTCGCCTGCCTCACATTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008689 True 2891 mRNA 0.52 4 8882494 8892523

Neighbor

gene id symbol gene type direction distance location
AMCG00008687 NA coding downstream 63048 8805776 ~ 8819446 (-)
AMCG00008686 dnajc14,LOC107737354,LOC107683641 coding downstream 81170 8791263 ~ 8801324 (-)
AMCG00008680 pan2,LOC107671829 coding downstream 126062 8730725 ~ 8756432 (-)
AMCG00008682 NA coding downstream 165168 8701778 ~ 8717326 (-)
AMCG00008681 NA coding downstream 223934 8635800 ~ 8658560 (-)
AMCG00008693 NA coding upstream 4214 8896737 ~ 8901751 (-)
AMCG00008691 NA coding upstream 21415 8913938 ~ 8916096 (-)
AMCG00008690 NA coding upstream 48977 8941500 ~ 8941823 (-)
AMCG00008692 NA coding upstream 65755 8958278 ~ 8967884 (-)
AMCG00008694 NA coding upstream 127437 9019960 ~ 9035943 (-)
G50836 NA non-coding downstream 41839 8837359 ~ 8840655 (-)
G50784 NA non-coding downstream 308156 8574014 ~ 8574338 (-)
G50740 NA non-coding downstream 498487 8372506 ~ 8384007 (-)
G50736 cdk2,LOC107683630,LOC107570445,LOC107737371,LOC107696023 non-coding downstream 521532 8357450 ~ 8360962 (-)
G50711 NA non-coding downstream 557719 8278752 ~ 8324775 (-)
G50915 NA non-coding upstream 251821 9144344 ~ 9149938 (-)
G50999 NA non-coding upstream 484049 9376572 ~ 9379452 (-)
G51002 NA non-coding upstream 488228 9380751 ~ 9381754 (-)
G51004 NA non-coding upstream 495735 9388258 ~ 9388608 (-)
G51005 NA non-coding upstream 496301 9388824 ~ 9389048 (-)
G50788 NA other downstream 222477 8656728 ~ 8660017 (-)
G50739 NA other downstream 511164 8367916 ~ 8371330 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other downstream 588140 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other downstream 589008 8281215 ~ 8293486 (-)
G50710 NA other downstream 613168 8269023 ~ 8269326 (-)
G51008 NA other upstream 498320 9390843 ~ 9393227 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other upstream 1445802 10338325 ~ 10370316 (-)
AMCG00008744 NA other upstream 1668343 10560866 ~ 10603373 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other upstream 1778426 10670949 ~ 10718201 (-)
G51241 NA other upstream 1783233 10675756 ~ 10712485 (-)

Expression


Co-expression Network