AMCG00008691


Basic Information

Item Value
gene id AMCG00008691
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 8913938 ~ 8916096 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008691
ATGACACTGCCACTCTTTTCGGCGCTATTAGTTTGTGTTGTACCGACTGTGGTCCAGACTTGGGTCGTCTCGACTTTTTTTGGGAGCCCCTGTACGACATATTTTTACATGTCCCATGAGCCCCGCGGGATGGCCCGGGGCAATGCCACCGCCCGGATCTGTCAGATGTTGGACGGCACCCCCCACTACGCCAGTCTCTACGACCGGAAAAAACGCATCCCTCTGTACTCTGCCTACATCATCCGGCTGCCGACGCACCCCCAGCCTTACTGGAAGCCGGGGGAGTGGTACATCGAACCGCagATGCAGACTATGGAAATGACCTACGGAAGTTTGTCTGGGCAGCTGAACCGATCGGAGATTAAGCAGCGTGTGCTGGAGAGCCAGGCCACAGACCACGACTACGCCAGGCTGGGCTACTCCCGCCAACGGCTGCACCCCAACTTCCTGCACGGCACCCCGGGTGAGTTGGTCACCTTTGCCCTCACGTATGAGGCGCCCATGTACAACAATTACAACCGCAACATCTGGTTCCTCAACCACGTCACCATGCTCCATGCCAAGATCCACAGCAACTGCACTGCACCCACCGACGTGTTTGTGGTGACCGGTGTGGTGCCCGATTCCCTGATCAGCGCCAGGGTCAGCTTGCCCGAGTTTGTGTGGACCgccctgtgctgtgctgccacAGGCTACTCCATTGCCTTCTTTGGGGAAGGTGACCCTCTGGAGCCCGATGTCATCGAGGTGGAGCTGACCGACCTGGAAAGCCGACTCAGCAGCCACTACCCCAGGCATGTCAAGGTGTTCCCTGGAGGATGCCCGTGA

Function

GO: NA

KEGG:

id description
K15049 ENDOD1; endonuclease domain-containing 1 protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008691 True 828 mRNA 0.59 2 8913938 8916096

Neighbor

gene id symbol gene type direction distance location
AMCG00008693 NA coding downstream 12187 8896737 ~ 8901751 (-)
AMCG00008689 NA coding downstream 21415 8882494 ~ 8892523 (-)
AMCG00008687 NA coding downstream 94492 8805776 ~ 8819446 (-)
AMCG00008686 dnajc14,LOC107737354,LOC107683641 coding downstream 112614 8791263 ~ 8801324 (-)
AMCG00008680 pan2,LOC107671829 coding downstream 157506 8730725 ~ 8756432 (-)
AMCG00008690 NA coding upstream 25404 8941500 ~ 8941823 (-)
AMCG00008692 NA coding upstream 42182 8958278 ~ 8967884 (-)
AMCG00008694 NA coding upstream 103864 9019960 ~ 9035943 (-)
AMCG00008699 NA coding upstream 120837 9036933 ~ 9067430 (-)
AMCG00008697 rnf41,LOC107723732 coding upstream 165731 9081827 ~ 9102880 (-)
G50836 NA non-coding downstream 73283 8837359 ~ 8840655 (-)
G50784 NA non-coding downstream 339600 8574014 ~ 8574338 (-)
G50740 NA non-coding downstream 529931 8372506 ~ 8384007 (-)
G50736 cdk2,LOC107683630,LOC107570445,LOC107737371,LOC107696023 non-coding downstream 552976 8357450 ~ 8360962 (-)
G50711 NA non-coding downstream 589163 8278752 ~ 8324775 (-)
G50915 NA non-coding upstream 228248 9144344 ~ 9149938 (-)
G50999 NA non-coding upstream 460476 9376572 ~ 9379452 (-)
G51002 NA non-coding upstream 464655 9380751 ~ 9381754 (-)
G51004 NA non-coding upstream 472162 9388258 ~ 9388608 (-)
G51005 NA non-coding upstream 472728 9388824 ~ 9389048 (-)
G50788 NA other downstream 253921 8656728 ~ 8660017 (-)
G50739 NA other downstream 542608 8367916 ~ 8371330 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other downstream 619584 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other downstream 620452 8281215 ~ 8293486 (-)
G50710 NA other downstream 644612 8269023 ~ 8269326 (-)
G51008 NA other upstream 474747 9390843 ~ 9393227 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other upstream 1422229 10338325 ~ 10370316 (-)
AMCG00008744 NA other upstream 1644770 10560866 ~ 10603373 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other upstream 1754853 10670949 ~ 10718201 (-)
G51241 NA other upstream 1759660 10675756 ~ 10712485 (-)

Expression


Co-expression Network