AMCG00008694


Basic Information

Item Value
gene id AMCG00008694
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 9019960 ~ 9035943 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008694
tttgtttgtttgtttgtttgtttgcactgGGTGGGAAACACGGTGGGCTGCAAAAGCTTTCATCCCAGTCggaaatatttgaaaaagagaaaataacgCACACTTTCTTTCGATAACCAGAAAATACACAACATCATCACCACTGGATCTGATCAGCGCTGGGCTCCTTAAACAGAACTATAACCAATACACCCAGGTGAAATTGCACACataaaaacaactacaacaacaagaacacaaGCTCACATCACAAATGTGTGTAGCCGGGTCTGCAGAGGGAAGACACACAAAGGAACAATTGAAATGAGCGAGAGAGACGCCTCTTCTTCTCCCCGCCCATTGAATACAAAGTTGCGTGCTGGTGCGGTGCAGCGGCAGTTGTGAGGCACCGGCTCGGCGCGGAGCGGAGCAGCGGCAGTGTGCGCCTCATTTCCCCGCAAGAGCCCGAGTGAGTGTGCGTGACTCTGCTCACCGGCGCGCAGTCATTTCACTCGCCTCGGACCTGTACTATGAAGAACATGACGTTTCGGAGAATCAAGAAGCTCAACTCCAACGACCCGGAGTCCACGAGTGCGCCTCAGGACAGCGGGGACATCTACCAGTCCTCCGCCTCGGACACGTACCGGACCCTGGAGCTGTCCAAGAAGAGCAGCTCGGAGGTTTACACTTACAGGACGCTCGCTTACTCCGGCGGGACGCTGCCCAGGAACTACAGAAAGGGCGCGCCTCAGAAATGGAAATCCCTGACGCAGTCCCCCGGCCAACAAAGGAAAATCATCATCCTGGAGAAAGAGGACCAGGAGACCTTTGGGTTTGAAATCCAGACCTATGGACTTCATCACCAGAATGAGAACTCTGTGGAAATGTGCACTTTCGTGTGCAAGGTGCACCCTAACAGCCCAGCACATCAAGCTGGACTCAAAGTGGGAGACACCATTGCCAGTGTGAACGATGCCAAGGTGGAGGGGTTCAGACACAAGGAGATCGTCCAGCTCATCAGGTCTTCAGGGAACACGATCAGATTGGAGACTGTTTTCGGGGATTCAATCAGAAAAGCAGAACTGGAGACCAGACTACAGTATTTAAAGCAAACCTTGCATGAGAAGTGGGAAGAGTATAGGTCTCTGATGGTGCAGGAACAGAGACTAGTTCGTGGCATCGTGATGAACAACCCCTCGGACTATGAGACACTCGAGTCGGTCCATGCGTGCATCTACGGGGGCAGCTCGGCCTCCCCTAGCCCGGCCGCCCACCGCCAGGTCTACACCACCGGCAGCACTTGCAGTAGCGCCAGCTACCTGAGCACCGCCACCGACGACGCCGAGGACCCCCTGTACCAAACCTGTCTGTACGACAGCAACGCCAACAACTCGGCTGAGGTGAAGAGTGCCAGGCCAACTGGGGACCTCCTGCCCCCTGCCAAGACGCATCTGACCCGCAGCGCCAGCACTCGCAGCTACCAGAGACCACCCACGGGCACCTGGGATAAATCGGGCAGTGGCCAGGGCAGCTACGGGTCCTTGCCGCGCAAGAGCAAGCAGAAAAGCTTCCGTAGGAGACTGTTAAAATTCATCCCAGGACTCAACCGCTctctggaggaagaggaaagcAAGCTATAGAACACAGAACTGTTCTTCTGTGgccttttgtatttcattgtgatttcttaagttatttatttattttgtttttatctgtaaataCTAGTTTTTTGGCGATTCGTTATGTTCTGGTTTTGTAAGTATGCTTCCCAATGGCAGACATTTTGGCCTGTCTGGCCTATTTTGgcttagttttctttttttgtacttCTGAAAATTATGAATAAGTTCCTCTGTTCCTCAGCAAACTTGTAAAAATAAACGCCTGGAATTTGAA

Function

GO: NA

KEGG:

id description
K24053 GRASP; general receptor for phosphoinositides 1-associated scaffold protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008694 True 1878 mRNA 0.51 8 9019960 9035943

Neighbor

gene id symbol gene type direction distance location
AMCG00008692 NA coding downstream 52076 8958278 ~ 8967884 (-)
AMCG00008690 NA coding downstream 78137 8941500 ~ 8941823 (-)
AMCG00008691 NA coding downstream 103864 8913938 ~ 8916096 (-)
AMCG00008693 NA coding downstream 118209 8896737 ~ 8901751 (-)
AMCG00008689 NA coding downstream 127437 8882494 ~ 8892523 (-)
AMCG00008699 NA coding upstream 990 9036933 ~ 9067430 (-)
AMCG00008697 rnf41,LOC107723732 coding upstream 45884 9081827 ~ 9102880 (-)
AMCG00008698 LOC105017093,LOC106583345,LOC106565408 coding upstream 114117 9150060 ~ 9170282 (-)
AMCG00008705 cs,LOC107707042,LOC107715034,LOC107671863 coding upstream 161490 9197433 ~ 9205392 (-)
AMCG00008702 NA coding upstream 187171 9223114 ~ 9229459 (-)
G50836 NA non-coding downstream 179305 8837359 ~ 8840655 (-)
G50784 NA non-coding downstream 445622 8574014 ~ 8574338 (-)
G50740 NA non-coding downstream 635953 8372506 ~ 8384007 (-)
G50736 cdk2,LOC107683630,LOC107570445,LOC107737371,LOC107696023 non-coding downstream 658998 8357450 ~ 8360962 (-)
G50711 NA non-coding downstream 695185 8278752 ~ 8324775 (-)
G50915 NA non-coding upstream 108401 9144344 ~ 9149938 (-)
G50999 NA non-coding upstream 340629 9376572 ~ 9379452 (-)
G51002 NA non-coding upstream 344808 9380751 ~ 9381754 (-)
G51004 NA non-coding upstream 352315 9388258 ~ 9388608 (-)
G51005 NA non-coding upstream 352881 9388824 ~ 9389048 (-)
G50788 NA other downstream 359943 8656728 ~ 8660017 (-)
G50739 NA other downstream 648630 8367916 ~ 8371330 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other downstream 725606 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other downstream 726474 8281215 ~ 8293486 (-)
G50710 NA other downstream 750634 8269023 ~ 8269326 (-)
G51008 NA other upstream 354900 9390843 ~ 9393227 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other upstream 1302382 10338325 ~ 10370316 (-)
AMCG00008744 NA other upstream 1524923 10560866 ~ 10603373 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other upstream 1635006 10670949 ~ 10718201 (-)
G51241 NA other upstream 1639813 10675756 ~ 10712485 (-)

Expression


Co-expression Network