AMCG00008695


Basic Information

Item Value
gene id AMCG00008695
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 9123241 ~ 9132238 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008695
TCTTAATCCCCGTCGAATCTGCAGGGCTATACATTCCAGAGTTTCTGAAAAATCAAATTTGAAGTTTATCTTCAGTCAGAGCTGGGTGACTTGGCGTCCCAATCCTCTAAAGTGAGATAAGGATCCTACGGCCCATCTTTACTTGCAAAACAAAGCATGTCAATAAGCACCAGGCCTGCGAATTGCGGCAATTCAATTAAGCTCTTATCGGTTCTCAGGGGTCGGCCAAATGTGTGTTTGCAGATCATTGTTCTGCACAACATTAACTCGCCTGCAGCTCCGAAACCACTTCGCTTTACAGACGGTTTCCCAAAGCAGTGAGATGGAAATGGTCCGAGAAGGTTGACCAGAACAGGACGGGAAGTGACTGGCTTTGTGGGCTGGTGGTCACGCCCACTCTCCTGCTCTGCCTCGTCATTGGTCCCGTTGGGGGTCAGGAATTGGTTAGCCCCGCCCCTGTGGCGCAGCTGCACCAATGGGGAGTGGCAGAGGGGGTGTGGAAGGCCAATGGGGAGGAGCTTCTGAGTTTGGAGGAGGCGCTAAAAGAGCAGggTTATTACCTGAGCCAGCTGTTCCTGCAATACGGGGAGAATGGTACTCTGTCTTATGAGGGACTGAAGGCCTTGCTGGGCAGCCTTGGCCTGGGGGAAGTCAGCATCCTGGAGATCAGACATCCAGGACACCGGCACGAGCCTCCCCTGGCCCCCACAGTGCAGCCAGGGGACCGGGAGCACAACCCCCACCACACAGAGCACCGTGGCCCCTTGCCATCACCCCCACAAAGGAGGCGTCTATCTGAGGGAGATGACCAGGCGATGGGATCATGGGAGCAGCCCCTGGATAGCTCCCCGGAAAGGACAACCGTGGTGCTCCAAAGTATCCCAGAGCACCCTGGGAAACCTCCAGTCCTCCAGCCTGAAGAGGGGCGCAAGTTGGAAATCCCCTTGGTTTTCAATCACCCTACTGAGAATCATCTCCACGGCAATtgtctaAATGTTACTCAGCTCCTGGGGAATTTTGGCCTGAGGAAGGAGTCCCATATCACCCCGGCCCACTTCACCTTTCTGTGCCCCGCCCTGCTCTACCAGATTGACAGCCGTGTCTGCATCCGCCACCAGCAGGAGGGCCAGGGGCCAGGGAAGGAGAGGGGCGTGTCTTTCCTCATGGCTCTGGGCTGGGGCTCCCTGGCTCTTACCGTCATTAGCCTGCCCTCCCTCCTGGCACTGGGCACTGTGCCCCTCCTGCCCTCCCACTGTCTCCACACCCTGCTGTGCCCTCTCGCTGCGCTGGCCGTGGGCACCCTGTGCGGGGACGCCCTGCTTCACCTGCTGCCCCATGCTGGGAAGGGATCACACGCAGAGCTGCAGGACGCTGTGCTGAAAGGGCTGTGTGTGCTGGGGGGGCTGTACCTCTTCTTCCTCCGAAGGAAGAGAGAGCGAGCCAGTTCTCTCCAGGAGGGGGCGACCGAGAGGGAATTGACAGCTTTGCAGGGCGCACCTCCACCTGACCAATCAGCTTCCCGTGATGGTGGGGGCCGGGCCGAGCAGGGCCAAACCCACTCGCATGGCGACCCCGCCCAGGTGCATGCTGGGATTAGCAGCCTGGTGTGGATGGTGATCATGGGTGATGGGATTCACAACCTGATCGATGGACTGGCCATTGggactGCCTTCTCTCAGAGCCTGGCGGGGGGCCTCAGTACCACAGTTGCTGTGTTCTGCCATGAGCTGCCCCACGAACTGGGTGACCTGGCGGTGCTGCTTTCGGCCGGCTGGCCTGTGCGCCGCGTGCTGCTGTTCAGTGTGCTGTCTGCAGGCCTGGGATTTCTGGGCCTGCTGGGGGGGACCCTGCTCAGCCAGCACTCCACAGAGCTCTCCACCTGGCTGTTCACCCTCACCGCCGGGGTCTTCCTCTATGTGGCTCTGACTGACATGATGCCTGAGATGCTCCGTGGATCCCCAGGTCCGGTGGGAGCCCTGACTCGTCTGCTCCTGCAACACCTTGGGCTCCTGATGGGGGGCGCCATCATGCTGTGCATCGCTCTGCTGGAGGACCAGATCACCCTCCTTCTGGCTTGAGCTCCGCCTacagtgcccccccacccctggacTCCTGGTGGTCTTATTCCAACCTTGTCACTTGTCGTCTGCTCTTAAACAAGGTGGAGATGGGTCAGGTCAAGGAGGGGACAACTGAGGCCAGAGTGAAAAACAGCCAGCAGACATGGGgtgtttttgtgtctgtgcATAACCCAAACAGTACTTCAATTGGTGGGGGATCAGATGCAATACTGCACAATGCCTCTGCACAGCCTGGACTAATGGCGGCTAAGTCTCCTAATTTTAAACTCAGTATTTATTGTACAGAATGGATTAGGatttattaatgtgtaaatgtggtGAGAACAtgactattttgtttttaattaaagtttttaaaatggTCA

Function

GO: NA

KEGG:

id description
K14711 SLC39A5, ZIP5; solute carrier family 39 (zinc transporter), member 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008695 True 2446 mRNA 0.57 12 9123241 9132238

Neighbor

gene id symbol gene type direction distance location
AMCG00008688 NA coding upstream 209899 8903214 ~ 8913342 (+)
AMCG00008685 NA coding upstream 242073 8866279 ~ 8881168 (+)
AMCG00008683 LOC106581923 coding upstream 282724 8826047 ~ 8840517 (+)
AMCG00008684 ormdl2,LOC104952346 coding upstream 338362 8780753 ~ 8784879 (+)
AMCG00008679 NA coding upstream 351393 8764331 ~ 8771848 (+)
AMCG00008701 coq10a,LOC102221461,LOC106917050,LOC102797363 coding downstream 43382 9175620 ~ 9184530 (+)
AMCG00008700 NA coding downstream 138124 9270362 ~ 9282607 (+)
AMCG00008706 NA coding downstream 158450 9290688 ~ 9309599 (+)
AMCG00008708 NA coding downstream 206593 9338831 ~ 9350517 (+)
AMCG00008712 NA coding downstream 257173 9389411 ~ 9391756 (+)
G50878 LOC100846954 non-coding upstream 128338 8994536 ~ 8994903 (+)
G50823 NA non-coding upstream 313850 8803206 ~ 8809391 (+)
G50757 NA non-coding upstream 534113 8572729 ~ 8589128 (+)
G50698 NA non-coding upstream 853915 8269007 ~ 8269326 (+)
G50692 NA non-coding upstream 876409 8246577 ~ 8246832 (+)
G50929 NA non-coding downstream 59539 9191777 ~ 9192377 (+)
G50930 NA non-coding downstream 60292 9192530 ~ 9192919 (+)
G50931 NA non-coding downstream 60777 9193015 ~ 9193685 (+)
G50932 NA non-coding downstream 62166 9194404 ~ 9194638 (+)
G50983 NA non-coding downstream 220740 9352978 ~ 9354405 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other upstream 429 9116675 ~ 9122812 (+)
G50900 rnf41,LOC107701697,LOC107756409,LOC107723732,LOC107671855 other upstream 35274 9081827 ~ 9087967 (+)
G50747 NA other upstream 456693 8450166 ~ 8666548 (+)
AMCG00008664 Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 other upstream 798463 8278853 ~ 8324778 (+)
G50583 NA other upstream 1183470 7933829 ~ 7939771 (+)
AMCG00008710 NA other downstream 177848 9310086 ~ 9316151 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other downstream 222854 9355092 ~ 9379579 (+)
AMCG00008725 NA other downstream 783256 9915494 ~ 9937752 (+)
AMCG00008727 NA other downstream 795149 9927387 ~ 9931515 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other downstream 1560139 10692377 ~ 10771675 (+)

Expression


Co-expression Network