AMCG00008701 (coq10a,LOC102221461,LOC106917050,LOC102797363)


Basic Information

Item Value
gene id AMCG00008701
gene name coq10a,LOC102221461,LOC106917050,LOC102797363
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 9175620 ~ 9184530 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008701
CACACGCACGTCCGGTATTTGTCACCTTTCGTGCTGACGCAAGCAGGGGGTGACGCAAGCAGGGGGTGTGGCCGGGGCGGCGTGACGTCTCCTCCAGTGACAGAGGCGAGCGGAGCAGTCCACCCGAGCCGGTATCTGGCGGAAGGTCGGAGATTTGTCTCAGTGAAAGGatatacagcaaaacaaaaacgagCCGCAGAAAGACACAAACATCTCGACAAATGACAGCACATCGGTGACAAGGGCCACGGACTGCTGGAAACCCCATGCCGGTTCCCGGGGTTTGGCGGATATATCGACTTGTTTTTAACGTTGGGCTGCCCGATACACAGCTTGCGTCGTGACATCGTATTGTTGGTCGCATCCAGCGCAACACAAACTAAACCCCCGGGGCGCTCGGCCGCACAGCACAGCACGACCGGGCTTTGGTTTCTGTTTACGACCGGTGCTCTTTCGGGGGGGGAGAAGAACCACCTACCCCCCGGCGGAGGGTGGTGTAACGCCCTCTCTTTCATAAAACACATCATAATATACGGCCATGGCGGTTTCAGCCACCGCTCGGCGGCTGCCCATGGGCGTCCGGACATACAGCGAGTTGCTGGAGATCATCACCCTGGGCACCGGCCGGTCCTGCAGCGCAGCGGGGGCCCGGGCCCGAGCACGGCAGCCAATCAGacACCTGTCTTCCTGTGGGATTCTCATGACGCGGactcccagaatgctttgctgCTTAGGGTGGGATTCACCCATTCCATTCAGTAGATCGTTCATCAACTTCACCAACCCGCTGACCAATAAGAGGAAAGAGTATTCTGAGCGCAGGATACTGGGGTACTCGATGCAGGAGATGTACGACGTGGTGTCCAATGTGGACGACTATAAACTCTTCGTGCCCTGGTGTAAAAAGTCCACAGTGATCATGAAGAGGTCAGGTCACGCCAAGGCCCAGCTAGAGGTTGGCTTCCCCCCCATCATGGAGAGATACACCTCAATGATCACCAACGTGCGCCCACACCTTGTGAAGGCCGTGTGTACCGACGGCAAGCTGTTCAACCACCTGGAGACAATATGGCGCTTCAGCCCTGGCATCCCTGGCTACCCCCGTACCTGCACTGTGGACTTCTCGATCTCCTTCGAGTTCCGCTCCCTGCTGCACTCCCAGCTGGCCACGGTGTTCTTCGACGAGGTGGTCAAGCAGATGGTGGCCGCCTTTGAGCGGCGGGCGTCCAAGCTGTACGGCCCGGAGACGCGCATCCCCAGAGAGCTCATGTTCCATGAGGTCCATCAAACGTGAAGCAGGGGAAACGGACAccactgcccccctcccccgcccGCTCTCTGTGCCACTGCAATCTCCCCAACCTCTGTCCCCCCCTGTCCCCACCTCCTGTCCCTCCACATCCTGGGGGAAGGAGCCTTGTAGCCCCCAGACAGGAGCTCAGAGCGGGTGGAGCCATTCCAGCCTTTACCACCATTCTCCTGAAGCAGTACAGTTTGCCCTCACATTGcgcgcacactcacacacacccacccactgTAAGGACCAGCAATTCCCATCGCAACATACAGGGCATCTCAAAAGCTAGCGTTCAATACAGACCTGCTTTGGTCCAGATCCCAGCAGAACAACCCCTCGTGTTTCTGTCTGAGCTGGGACTTCCCTGCAGCCGCAGTGAATTCAGAGcgatcattttagttttttcctaaCCCCCTACCCCAACCTCACACAGGGGTGATTGTTGGACTGAATCTGGGCCGCAGACCCTGTATCTGAAAGTGGAGCACACTGTAGCCACATTCCTGCTGCTCAGTCATGAGTGGAGAATTGGGGCAGGTGG

Function

symbol description
coq10a Predicted to enable ubiquinone binding activity. Predicted to be involved in cellular respiration and ubiquinone biosynthetic process. Predicted to be located in mitochondrial inner membrane. Predicted to be active in mitochondrion.

NR:

description
coenzyme Q-binding protein COQ10 homolog A, mitochondrial

GO: NA

KEGG:

id description
K18588 COQ10; coenzyme Q-binding protein COQ10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008701 True 1838 mRNA 0.58 5 9175620 9184530

Neighbor

gene id symbol gene type direction distance location
AMCG00008695 NA coding upstream 43382 9123241 ~ 9132238 (+)
AMCG00008688 NA coding upstream 262278 8903214 ~ 8913342 (+)
AMCG00008685 NA coding upstream 294452 8866279 ~ 8881168 (+)
AMCG00008683 LOC106581923 coding upstream 335103 8826047 ~ 8840517 (+)
AMCG00008684 ormdl2,LOC104952346 coding upstream 390741 8780753 ~ 8784879 (+)
AMCG00008700 NA coding downstream 85832 9270362 ~ 9282607 (+)
AMCG00008706 NA coding downstream 106158 9290688 ~ 9309599 (+)
AMCG00008708 NA coding downstream 154301 9338831 ~ 9350517 (+)
AMCG00008712 NA coding downstream 204881 9389411 ~ 9391756 (+)
AMCG00008711 NA coding downstream 215956 9400486 ~ 9408758 (+)
G50878 LOC100846954 non-coding upstream 180717 8994536 ~ 8994903 (+)
G50823 NA non-coding upstream 366229 8803206 ~ 8809391 (+)
G50757 NA non-coding upstream 586492 8572729 ~ 8589128 (+)
G50698 NA non-coding upstream 906294 8269007 ~ 8269326 (+)
G50692 NA non-coding upstream 928788 8246577 ~ 8246832 (+)
G50929 NA non-coding downstream 7247 9191777 ~ 9192377 (+)
G50930 NA non-coding downstream 8000 9192530 ~ 9192919 (+)
G50931 NA non-coding downstream 8485 9193015 ~ 9193685 (+)
G50932 NA non-coding downstream 9874 9194404 ~ 9194638 (+)
G50983 NA non-coding downstream 168448 9352978 ~ 9354405 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other upstream 52808 9116675 ~ 9122812 (+)
G50900 rnf41,LOC107701697,LOC107756409,LOC107723732,LOC107671855 other upstream 87653 9081827 ~ 9087967 (+)
G50747 NA other upstream 509072 8450166 ~ 8666548 (+)
AMCG00008664 Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 other upstream 850842 8278853 ~ 8324778 (+)
G50583 NA other upstream 1235849 7933829 ~ 7939771 (+)
AMCG00008710 NA other downstream 125556 9310086 ~ 9316151 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other downstream 170562 9355092 ~ 9379579 (+)
AMCG00008725 NA other downstream 730964 9915494 ~ 9937752 (+)
AMCG00008727 NA other downstream 742857 9927387 ~ 9931515 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other downstream 1507847 10692377 ~ 10771675 (+)

Expression


Co-expression Network