AMCG00008704


Basic Information

Item Value
gene id AMCG00008704
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 9232126 ~ 9255654 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008704
ATGTCGCTTGACTCGGGCCAATCTGGCACAGACCGCTTTCTCAGGGTTCTCGTTCTGGCACATTTGAGCCGATCTCACAGCTCTGCGGACCTTGGGGGTTCAGGTGGCCCCCCTAGAAACTGGAAGGGGATCGGCATCGCAATGGCGGTGATTGTGGTGGTCCTGTCCCTGGTCATCATGTCCATCATCCTGCTCACCCCAGATGAGTCTCGCCTCCTGCAGCAATCCAGGCTCACCTTGGAAGACCTGGAGAGCGAGGAGTTCAAAGTTCATGACCCCGTGTACGAGCTTGCGCTGCGCACCAGGCAGGGTCATGTCATCAAACACGACGTCGGCAGCAACTACAGCACCACCCTGGTGGAGAACAGCACCTTTTTGACTCTAAAAGCGACGAAGTTCCAGGTGTCTCCAGACCAGAGGTTTGTGTTGTTGGCGTACAACGTGCAGCCGGTATACACACAGTCCTTCACAGCCTCCTATGCCATCTACAATGTGGGCACCGGgGAGATCTTGGAGCTCAACCCCCCCGAGGTGAAGCCCTCCGTTCTACAGTTTGCCGCCTGGGGGCCCCAGGGGAATCAACTGGTTTACATCTTTGAAAACAATATCTACTACCAGCTAGATGTGTCCAGTAGTGCACTAAGACTGACCTCCACTGGTAGAGAGGGGCTGGTCCTCAATGGCATCTCTGATTGGCTCTACGAGGAGGAAGTGCTTCTCACATACCCCGCCCACTGGTGGTCAGGTGACGGGGCACGCCTGGCCTACCTGGCCATCAACAACTCTGCCACGCCCATTATGGAGATCCCCTACTTCCTGGGTGGAGTCTACCCTGCCAATGTCTACTATGCTTACCCCAAGTACTATATCTCGATGGTGACCTGGATTAGCAGCACCCGACTGGCTGTGCGATGGTTAAACCGGCCACAGAACCAATCGGTGCTCACCGTGTGTGAGGCCACGACTGGGGCGTGCTCAGAGaaacacaaaatggCCGTGGATGTGTGGCAGAGTCAGCGACAGCAGGAGGCACCGCTGTTCTCTCCAGACGGCTCCTTCTTCTACCTCACCCTGCCGGCCAAACAGGGGGCACGGGGAGAGTTCCACCACATCGCCACGCTGAGCGACCAGccTGCCGTTCCCTCTACTCCATCCCGTTTCCTGACCTCTGGGAACTGGGATGTGATGTCACTGTGCGCCCTGGACGAGCAGCGGGGCAAAATATACTTCCTGAGCACCGAGGAGTCGATGCACAGCAGACACTTATACAGTGCCGACATCACCGGCGTGTTCCAGCGCCACTGTATGACCTGTGACCTCCTGCACAATTGCAGCTTTTTCAGCGCAAAATTCAGCCCGAACCGGACCAGCTTTACCCTGCACTGCCACGGGCCAGGAATCCCCCAAGTCACCGTTCACAGCACCGCCGACCCCCACAGTTACTTTGTCCTGGAGGATAACGAGGCCTTGGCTGCGGTTTTGAGTCGGAAGCGACTGCCGGTCACCGAATTCAAGACAGTCCCAGCTGAGGGCTATGATCTGCCTCTGAAGTTGGCTCTGCCCCCCGGGTACAAGGGGAACCTGCACCCCCTCCTCATCCTGCTagATGGGGTtccaggcagtcagtcagtgacgGAGAAGTTTTCCCTGGACTGGACAGTGTCTCTGTCCAGCTCCCTGGGGCTGGCTCTGGCTTGGGTGGACGTCAAGAGAGGCAGCTCTCGGGGTCAAAGGTCGCTTGGGCCGGACTCGCGCAGCTTAAGCTCGGCACAAGTCAAGGACCACCTAAGCGCAGTGCAGTGGTTGACGCAGCTGCCATACATTGACCAGAGGAGGGTTGCTCTGTATGGGAAGGCCTTTGGAGGGTATTTGACCCTGAAGATGCTGGCAGCCTCGGAGCACAGATTTAAGTGTGCTGCAGCTGCCGCCCCCATCACGGACTTCCGCCTCTACAGTGCAGCGTTTTCAGAGCGGTACTTGGGATTGCCAGCCAAAGAGGAGACCTCGTACACTaCGGCCTCTCTGCTGGGGGAGGTTCACAAGCTGAAGGACGAGGATTTCCTTCTGCTCCACGGCACGGCTGACGCCCGGGTCCATTTCCAGCACACCGCCGAGCTCCTGAGCGGCCTGGTCCTGGTGGAGGCCAACTATACCCTGCAGATCTACCCAGACGAGGGCCATACCCTGAGGGGGAAGCGCAGCATGCGCCACTGCAGCCAGACACTGAGCCGCTACTTCAGCAGCTGCCTGCAGAACCCCCGCTGGAGGTCCACCGAGGGGCAGGAGGATGAGAACTGACCCCCGCCCACCAGCCTCCcagccctctccctctcccccacccccccaggaCCGAAGCCAGCTCAGATAGTGGCAGCCCCTGTCTTCTCAATCCACACAACCTTCCACAATTCTCCTCAGGACTCTGTAAAACCGTGTACTgtctttgtttccattttttacCAATCCTGACGGGATCACAGCAGAGGTAGGGAGCGCCATCGTATCACAAACCTCCAGGCCCTGCCATTTCAGCTAAAGGTCTCTACACTTCAGGACTGTGAGGGGGACACTTAGGAGGTGCAGCGAGAAAGCCAGGCCCAGGATAATGGTCCTCTGACAGACACTTCCGGATTTGGCAGTACTCTTCCAGTTTCCGGGGgaagaataaagaaaagagGTTCCCTTTGTGAAAATGGTAGAGACAATTAAAGGGGAGACTGGTGGACAACCCTAATGCACTGGACAGCTCTGGGGAACTGAGGATTTTGAGAGTGTATTATGGTGACTCCTGTTTTTGTGTGACATCACTTCACTGCTTTGctttaagaacaacaaaaaaagtatcAGCAGCattttttgattgttgttttatctTGCTTGACGGActgactgcattttaaaactgagGTCTGACAGATGTCTCTCGTTAAAGCCTGACTCTTGAATTATACCCAAACCTAATTCCTTGTGTGTCACTTACCCTGTTTTGCGTTTTCCACCTACGTACTGAGAACTGCTTCTGCCGAGGTTGCTGTTTATGGGCTTCCCACCCTCCCGATGTGTGCTTATTTTGCAGTTTGGCAGCAGTTAGAATTATGTTTATGAATTGCCCAACACCCCTTGGAAATGTCTTGCCCAGTTGAAAGTATCGGCAGTATTGAGTGCTGCTGTCATGACCCCAGATCTCTCTACCTCGGGAAAGGCATGCGCTAGGTTTGTTCTCAAGGCCTCCAAAACTGTGCTTCCCAAAGAGCAAAATGGGATACATAGAGAAACTACCAAACCAACACCGAAAGGTAGATTTATTATGACTACCTTTTATTCATAAGACCTAACAGGTTCACTTACTATTGCTAGTAAGTAGCCAGGTTTCATACAATGttaattttatgttaataatgttCTGGTGGCTACCCTGGGGGGGAAATGAGAGAACATTTCTGAAATCTCAATTTTCAGAGTCTTTTTGAATACCTGTGTGGCTCTAAAATGGTGCTAAAGCAATTAACCGACTGATCTCAGCAGCTTAGGTGTAGCTCTACAGTGGGATGCGGTTGCATAATGATGATTTGTTCGAAACTCCACTACTCCATGCGTTACTTCTTGGTAGCATTGTCAAGACATTGCCATAATTCTAATGTTTTTACGTAATAAGTGGATGTCTATATACATATTGGATGGGATTGATTCCTGTAAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008704 True 3701 mRNA 0.53 25 9232126 9255654

Neighbor

gene id symbol gene type direction distance location
AMCG00008702 NA coding downstream 2667 9223114 ~ 9229459 (-)
AMCG00008705 cs,LOC107707042,LOC107715034,LOC107671863 coding downstream 26734 9197433 ~ 9205392 (-)
AMCG00008698 LOC105017093,LOC106583345,LOC106565408 coding downstream 61844 9150060 ~ 9170282 (-)
AMCG00008697 rnf41,LOC107723732 coding downstream 129246 9081827 ~ 9102880 (-)
AMCG00008699 NA coding downstream 164696 9036933 ~ 9067430 (-)
AMCG00008703 NA coding upstream 27896 9283550 ~ 9287687 (-)
AMCG00008709 dazap2,LOC106572518,LOC106567170 coding upstream 65923 9321577 ~ 9326719 (-)
AMCG00008713 NA coding upstream 158044 9413698 ~ 9417891 (-)
AMCG00008717 NA coding upstream 276179 9531833 ~ 9554934 (-)
AMCG00008719 NA coding upstream 307246 9562900 ~ 9565171 (-)
G50915 NA non-coding downstream 82188 9144344 ~ 9149938 (-)
G50836 NA non-coding downstream 391471 8837359 ~ 8840655 (-)
G50784 NA non-coding downstream 657788 8574014 ~ 8574338 (-)
G50740 NA non-coding downstream 848119 8372506 ~ 8384007 (-)
G50736 cdk2,LOC107683630,LOC107570445,LOC107737371,LOC107696023 non-coding downstream 871164 8357450 ~ 8360962 (-)
G50999 NA non-coding upstream 120918 9376572 ~ 9379452 (-)
G51002 NA non-coding upstream 125097 9380751 ~ 9381754 (-)
G51004 NA non-coding upstream 132604 9388258 ~ 9388608 (-)
G51005 NA non-coding upstream 133170 9388824 ~ 9389048 (-)
G51006 NA non-coding upstream 133557 9389211 ~ 9389570 (-)
G50788 NA other downstream 572109 8656728 ~ 8660017 (-)
G50739 NA other downstream 860796 8367916 ~ 8371330 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other downstream 937772 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other downstream 938640 8281215 ~ 8293486 (-)
G50710 NA other downstream 962800 8269023 ~ 8269326 (-)
G51008 NA other upstream 135189 9390843 ~ 9393227 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other upstream 1082671 10338325 ~ 10370316 (-)
AMCG00008744 NA other upstream 1305212 10560866 ~ 10603373 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other upstream 1415295 10670949 ~ 10718201 (-)
G51241 NA other upstream 1420102 10675756 ~ 10712485 (-)

Expression


Co-expression Network