AMCG00008709 (dazap2,LOC106572518,LOC106567170)


Basic Information

Item Value
gene id AMCG00008709
gene name dazap2,LOC106572518,LOC106567170
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 9321577 ~ 9326719 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008709
ATGAAGCCTAAACGCACAGTGCCTGTGAGGCAGCGGGTGGTTTATCGCGCCGGCTGTGCGTATCCCCAACAGCCCGCCTACGCCCCCCAGCAGACCTCCGCAGGTCTGTACCCACCAGGTATGCAGGTGCCCACCCAGGCACCCCCCTACTCCGACGCTCCCCCGGCCTACTCTGAGaTCTACCAGCCCAGGTACATGCACCCCCCCCAGGCCCCCGGCCACCTGCCCCAGATGTCCTCTGCCTACCCTGGGACACAAATGTACGTGCCCCTTGCCCAGTCGATGCCAGTGGGAGCCGTCGGTCCCAATGTGCCCATGGCGTATTACCCAATGGGACCTCTTTACCCCCCTGGCTCCACGGTGCTGGTGGAAGGGGGCTATGATGCTGGTGCCCGCTTTGGAGCTGGCAGCTCAGCGACCATCCCAccccctccccccggACACCTCCCGAACGCAGCCCAGCTCGCTGCCATGCAGGGTGCCAACGTGATGATGACACAGCGGAAGGGCAACTTCTTCATGGGCGGCTCCAACGGGGGTTACACCATCTGGTAA

Function

symbol description
dazap2 Predicted to be located in cytoplasm and nucleus. Is expressed in central nervous system; peripheral olfactory organ; and pronephric duct. Orthologous to human DAZAP2 (DAZ associated protein 2).

NR:

description
PREDICTED: DAZ-associated protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008709 True 555 mRNA 0.65 4 9321577 9326719

Neighbor

gene id symbol gene type direction distance location
AMCG00008703 NA coding downstream 33890 9283550 ~ 9287687 (-)
AMCG00008704 NA coding downstream 65923 9232126 ~ 9255654 (-)
AMCG00008702 NA coding downstream 92118 9223114 ~ 9229459 (-)
AMCG00008705 cs,LOC107707042,LOC107715034,LOC107671863 coding downstream 116185 9197433 ~ 9205392 (-)
AMCG00008698 LOC105017093,LOC106583345,LOC106565408 coding downstream 151295 9150060 ~ 9170282 (-)
AMCG00008713 NA coding upstream 86979 9413698 ~ 9417891 (-)
AMCG00008717 NA coding upstream 205114 9531833 ~ 9554934 (-)
AMCG00008719 NA coding upstream 236181 9562900 ~ 9565171 (-)
AMCG00008718 bloc1s1,LOC107573571 coding upstream 252670 9579389 ~ 9587169 (-)
AMCG00008723 NA coding upstream 413565 9740284 ~ 9757947 (-)
G50915 NA non-coding downstream 171639 9144344 ~ 9149938 (-)
G50836 NA non-coding downstream 480922 8837359 ~ 8840655 (-)
G50784 NA non-coding downstream 747239 8574014 ~ 8574338 (-)
G50740 NA non-coding downstream 937570 8372506 ~ 8384007 (-)
G50736 cdk2,LOC107683630,LOC107570445,LOC107737371,LOC107696023 non-coding downstream 960615 8357450 ~ 8360962 (-)
G50999 NA non-coding upstream 49853 9376572 ~ 9379452 (-)
G51002 NA non-coding upstream 54032 9380751 ~ 9381754 (-)
G51004 NA non-coding upstream 61539 9388258 ~ 9388608 (-)
G51005 NA non-coding upstream 62105 9388824 ~ 9389048 (-)
G51006 NA non-coding upstream 62492 9389211 ~ 9389570 (-)
G50788 NA other downstream 661560 8656728 ~ 8660017 (-)
G50739 NA other downstream 950247 8367916 ~ 8371330 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other downstream 1027223 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other downstream 1028091 8281215 ~ 8293486 (-)
G50710 NA other downstream 1052251 8269023 ~ 8269326 (-)
G51008 NA other upstream 64124 9390843 ~ 9393227 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other upstream 1011606 10338325 ~ 10370316 (-)
AMCG00008744 NA other upstream 1234147 10560866 ~ 10603373 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other upstream 1344230 10670949 ~ 10718201 (-)
G51241 NA other upstream 1349037 10675756 ~ 10712485 (-)

Expression


Co-expression Network