AMCG00008711


Basic Information

Item Value
gene id AMCG00008711
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 9400486 ~ 9408758 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008711
GTCAGTGGAGAGACGCTGGCTCTGGTTTTGCTTCTTCACTGTCCAAGGAGCAGTATGAAGCCTGCGATGCCGTTTCTTCTGTTGGCCCTGTGGTTTCCACCTTCTCTGCTGGCACAAGGCAAGGTGCAGTGGGAGGCGCTGTATTTCAGTGATGACACTCAGAAGCTCCTCTTGAGTCCAGTGAAGGCTCCAGAGCCTGGCAGAGTGATTTGGGAGTGGGCGCCACATGATGGTTTGCGGCAACAATACCTCACTCTGGTCGAAACCAGTTttccaagcaaacaaaaattCGATAACAAGAACTTTGGCCAACCCTTGGAGATCATGGGCGGCGTGCTGAAGATCACACAGCCCCGATTCAAGAACGCCGGTTACTTCACTCTGAGGCAACTGGGTCCTCAACCGCAGATCTTGGCACAGTATGACGTGACGGCAGTGCAAGTCTTTCCCAAGACCTCAACTTTAGACCCCAGTGAGGACGTCACACTGGGCTGCAGGGCCTCTAAAGCCAGGGATTCCTACAGTCTCAAATGGAAAACCACCCCTGGATCCGACAGGAGCGGCAGCACCACAGAGCTGAGGTTTAATGAAACATCGTACCTCATAGTCAACCGAGTACACCACAAACCGGGCACAGATACATACGTTTGTGAGCTTCGGCTAAACAGGACCGTGGTTCACAGTAACTCGGCGGCCCTCACTTACACTGTCCAGCAAAACCTGCGCAGTTCTGTGTTCCGAGCCAGTGTGCCACGCAGCAAGATCACCATCGTGCCCAGAATCCGGACGCCCTTAGATcatgaaatcattttaaagtctCCATTCACCGTGCAGTGGGAACCCCGCCTGCTGGCCCAGGACCGCAAAATCATATTCACAGCAGAGTCTTCCGTCTCTGCCAGTGGAGGGCTGCAAGTTTCCCTAACCTGCACGGCCTCTAGTCTCCCGGCCTCCACTCGCCTGCTTTGGATCGACCCCGATGGTAGGGAGGCTGCGGCAACACTGGACCTGCAAAGCAACTCTCTCACTCTGGGGCACCTTGAAATCCAGGCCCAGGCCTCACAGTGGAGCTGTGTGCTTTTTGAAGGAGAGATTCTGCGTGCCGTTTATCCGTACACTCTGCGCATCCCAGACCAGAATTATCACCCCTCAGATGCCATTGCATTGTGGGTGCTGGTGGGATACCTGGGAGTGAAGGTGACAATCTTGGTGTGGCTCTGTTGCCTCTTCTGCAAGTGGGTGGCAGGAGAGCAAAAGAAGCACCAGGCCACACCGCAGGCTAAGGTGGCTGACGGACGGCACGCCGCCTCACCTGGGAGTGCGCCACCTGCGGGGATAATAAGATAACAAGCTGTGGCCAGTGGATCAGAACTGGGTTgccacaaacacaaaccttattttatacttttcctaTAAGCAGTTTATTATGGAAAGGAATGCAACTACCCTGGAATCAAACTGGGGTAACACTTTTGTTTGGGAAAGTATTTGGTTAGATTCCCCAACATAAAAGGTAAAGGGATGTGTTGATACTGATCTGTAATGCATAATGATTCCTGTTGTCCTGATGCACAAGATCAATCCTAGCCGTGTATGGCATGAACAGAAGATGGCGCTAAAGACTTATATTAAggagcaaaaaatatatatatattcaaatagtACTGACTGTATTACATTGTGGTGCCTGCGCTGAGAATGTTGTGAAAAATGCTTTcagatgtaaatatatatatatatataataaaaggaaaatgggAACAGTTACAGTCTTACAACGCTTGGAGGAAAGCCGTGCTTCCTGATCTCAGTGTGGAATACGCCGGTCTCAGATTTCAAGGTTAGGTTCAATTCCAGTTCCAGCACTAACATTGTTGGTAGAAAGCCAAACCAAGGCAGAACTTTAAGAAAGAGCTCATATACCTTGTCCTGTCATCTGGAGATGAGGGCTGGAGGATTTCTATTATAGGATCTGGGCTTTGTCAGAactggcagcagtgtggagaagtggttggggctctggactctggagtggagaaTTGTGGgatcaatcccaggtgggggacactgctgttgtacccttcaGCAAGGGACTGTACCGAGACTGATTCAGTAAGAAAAccgctgtataaatgggtaattgtatgttaaaaaaatgtgatgtagTGTAATaattttaagtcaccctggataagggcatcagTTAAGAAAGCCAGTAAACTGATTCTCTTACGCAGCTGCATAAGAGACAGGGGTTATTAAAAAGGTTTGCAATAATGTCATATCCAAATCAGCTGCTAGAGCCCGAGCAGTGGCTGCCCCTGTACTGGAAGTGTCTCGGTACCCTCCCTGGCCACTGGCACTGTCTCAGTTGGTTTGTGGGCTGAATTTTAAGAGGCCTCATTTCCACAGCTTGGCGCTTACCTAGGGAGACACTGTGTTACAGAACTGAGTCCGctttctgcttctctctccctgtagcTCTCTGCTTCTGTTTAGCTTGGACAGAGGCTCTAATTGAATGGGTTGGCTGCCCCTGTTTTAATAAAAGTCTTTGGCTCTTTTTACAAGCTCCGTAAAAGCTGGGCTCTTACCGCACACAAGGGGTCTCGTCTTGATAAAGCACCACAAGACTGGAGCTATTTTCACAGCGTGCTGCAGGGGAACCCTGAGAGATCGTGCATTTTCATCTCCTGGACTGAAACTTAAAGTaaattttgtattctgtttttaattctctgtgttctgtggatatatatatatatacagtcagggaaaaaagtatttgatcccctgctgattttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008711 True 2805 mRNA 0.48 6 9400486 9408758

Neighbor

gene id symbol gene type direction distance location
AMCG00008712 NA coding upstream 8730 9389411 ~ 9391756 (+)
AMCG00008708 NA coding upstream 49969 9338831 ~ 9350517 (+)
AMCG00008706 NA coding upstream 90887 9290688 ~ 9309599 (+)
AMCG00008700 NA coding upstream 117879 9270362 ~ 9282607 (+)
AMCG00008701 coq10a,LOC102221461,LOC106917050,LOC102797363 coding upstream 215956 9175620 ~ 9184530 (+)
AMCG00008715 NA coding downstream 79737 9488495 ~ 9525687 (+)
AMCG00008716 NA coding downstream 119140 9527898 ~ 9529672 (+)
AMCG00008714 NA coding downstream 123033 9531791 ~ 9537457 (+)
AMCG00008720 NA coding downstream 212351 9621109 ~ 9639246 (+)
AMCG00008722 NA coding downstream 283333 9692091 ~ 9695072 (+)
G51000 NA non-coding upstream 2117 9392027 ~ 9398369 (+)
G50983 NA non-coding upstream 46081 9352978 ~ 9354405 (+)
G50932 NA non-coding upstream 205848 9194404 ~ 9194638 (+)
G50931 NA non-coding upstream 206801 9193015 ~ 9193685 (+)
G50930 NA non-coding upstream 207567 9192530 ~ 9192919 (+)
G51065 NA non-coding downstream 231998 9640756 ~ 9715167 (+)
G51094 NA non-coding downstream 383380 9792138 ~ 9794219 (+)
G51129 NA non-coding downstream 564538 9973296 ~ 9975207 (+)
G51134 NA non-coding downstream 570640 9979398 ~ 10071199 (+)
G51157 NA non-coding downstream 811475 10220233 ~ 10222915 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other upstream 20907 9355092 ~ 9379579 (+)
AMCG00008710 NA other upstream 84335 9310086 ~ 9316151 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other upstream 277674 9116675 ~ 9122812 (+)
G50900 rnf41,LOC107701697,LOC107756409,LOC107723732,LOC107671855 other upstream 312519 9081827 ~ 9087967 (+)
G50747 NA other upstream 733938 8450166 ~ 8666548 (+)
AMCG00008725 NA other downstream 506736 9915494 ~ 9937752 (+)
AMCG00008727 NA other downstream 518629 9927387 ~ 9931515 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other downstream 1283619 10692377 ~ 10771675 (+)
AMCG00008752 LOC107666323 other downstream 1419810 10828568 ~ 10846436 (+)
G51297 NA other downstream 1576132 10984890 ~ 11040674 (+)

Expression


Co-expression Network