AMCG00008713


Basic Information

Item Value
gene id AMCG00008713
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 9413698 ~ 9417891 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008713
atggCTGAGAACATTAATCTCCCAACCCTctccaaactgtcagaaagcgaCATTGAAAGGATTTGGACCAGTGTGTCCAGATTCATTGAGGACACAATGTCTCTCCAGAAGGCAGTTTATGTGCGGGGCCTGGGCACCTACACCTGGTCCGTGCGGAAGGTGGATATGGGAAATGGGGTTGTTTTAACCCGCAGACCCATCTTCCAAATTTCTGCAAAGGCTGCCCAAAGGCATGGGCTAAAGCAGCGCAAGGTGCTTGCTGTAGGCGATGTGCGGGTCGTCCCCGTAAATTTCACGGCGCTGGCACGGGGGACCCCGTTTGATAGGAACACAGTAGAGCGCTGTGTGCACAGGAGCGTGCAGCTGCTCCTCCGAGGCATGGCCGCCCAGGGCAGCATCTTCACCTTCGCCGGCATGGGCGTGCTGTCCCTGTGCAATGGCAATGTTCTGATGAACTTCAGAAAGCCGTTCCTGGATGCCGTGTCCACAGTGGAGAGAAGGACCATGCAGAAGGAGGGGCACAAACCCCCTGCTGGAGTGAGTGAGGAGCCGGACAGGAGCCTGAAGCCCACCGCAGCAcgagggaggcaggcaggcaaagGgCGGAGACTGGACTATTCCATGCCATCTCGGTGTTGTGTCCCTGAGCTGGAGCAGAAGGCACAGACACCGGTGTCCAGTCGTCCCAtccccctgggctctgaatgtgCCGCCCATGAGCGCGCAGGACAGGTGAGGGAGAGACCAGCAGGTCGCCGGGACCAGAGGAGGCCCAAAGACCAGCCAGCCCAGAGAAGGCCCACTGACCACCTGAGCCAGAAAAGTCACACAGACCAGCCAAACCAGAGACGGCCCACAGACCAGCCGGGCCAAGAGCCACCACGCAAGAGAGCAACCCTAATGAGAGGATCTCTCTTTAACAGCATTCTGTGTCAGATTCAGAAGCAGGAGGCGCTCAGGATGACAAGGAAGGAGCGGGTTGCTGAACGCATCACTCGCTACGAGACCTTCCACGGCATGCGGGAATCACAGGACATGTGGGCACACAGAGCTGACACCAAACCCCGGCACCGAGAGCAGACCAAGCGCAGCTTCATCAGGTCTAGCAGCCACCAGCTCATGGACCAGTGTGTGAAGTCCTGCCGAAAGAGACGCACCACCAACTGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008713 True 1170 mRNA 0.58 8 9413698 9417891

Neighbor

gene id symbol gene type direction distance location
AMCG00008709 dazap2,LOC106572518,LOC106567170 coding downstream 86979 9321577 ~ 9326719 (-)
AMCG00008703 NA coding downstream 126011 9283550 ~ 9287687 (-)
AMCG00008704 NA coding downstream 158044 9232126 ~ 9255654 (-)
AMCG00008702 NA coding downstream 184239 9223114 ~ 9229459 (-)
AMCG00008705 cs,LOC107707042,LOC107715034,LOC107671863 coding downstream 208306 9197433 ~ 9205392 (-)
AMCG00008717 NA coding upstream 113942 9531833 ~ 9554934 (-)
AMCG00008719 NA coding upstream 145009 9562900 ~ 9565171 (-)
AMCG00008718 bloc1s1,LOC107573571 coding upstream 161498 9579389 ~ 9587169 (-)
AMCG00008723 NA coding upstream 322393 9740284 ~ 9757947 (-)
AMCG00008724 NA coding upstream 347832 9765723 ~ 9794180 (-)
G51015 NA non-coding downstream 2724 9409759 ~ 9410974 (-)
G51007 csrnp2,LOC106567166,LOC107594006,LOC107715040 non-coding downstream 23537 9389784 ~ 9390161 (-)
G51006 NA non-coding downstream 24128 9389211 ~ 9389570 (-)
G51005 NA non-coding downstream 24650 9388824 ~ 9389048 (-)
G51004 NA non-coding downstream 25090 9388258 ~ 9388608 (-)
G51044 NA non-coding upstream 103463 9521354 ~ 9525687 (-)
G51057 NA non-coding upstream 159377 9577268 ~ 9578383 (-)
G51081 NA non-coding upstream 320755 9738646 ~ 9739256 (-)
G51103 LOC106928590,LOC103386378,LOC107385311,LOC106514726 non-coding upstream 491720 9909611 ~ 9910800 (-)
G51120 NA non-coding upstream 509354 9927245 ~ 9931102 (-)
G51008 NA other downstream 20471 9390843 ~ 9393227 (-)
G50788 NA other downstream 753681 8656728 ~ 8660017 (-)
G50739 NA other downstream 1042368 8367916 ~ 8371330 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other downstream 1119344 8270324 ~ 8294354 (-)
AMCG00008668 LOC106456382,LOC108433351,LOC107714908,LOC103467923,LOC108433416,LOC103367934,LOC102193505,LOC108255233 other downstream 1120212 8281215 ~ 8293486 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other upstream 920434 10338325 ~ 10370316 (-)
AMCG00008744 NA other upstream 1142975 10560866 ~ 10603373 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other upstream 1253058 10670949 ~ 10718201 (-)
G51241 NA other upstream 1257865 10675756 ~ 10712485 (-)
G51250 NA other upstream 1379741 10797632 ~ 10799154 (-)

Expression


Co-expression Network