AMCG00008716


Basic Information

Item Value
gene id AMCG00008716
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 9527898 ~ 9529672 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008716
ATGTGGCCGGCAGCATGGGGGGATGAGGTGCAATACCTGGAGAACGCGAAGGAGCGTGTGGTGAACGGAGTCGAAACCAAGCCACACTTCTGGCCTTGGCAGGGCACGGAGCAGTACATCAACGTGTACCGCGTCTTCCTGCACCCCAACTGGAACTCCAACAACGTTGCCAACGGGTCCGTGTCCCTGACCGCGCTGGCCTGGTCCAGAAAGCCCTCCCCGCTGCTGATCGTTGGCCGTCCCGTAACGTACGATATCGCCCTGCTGAGACTGTCTCAGGATGCCACCATCAACAACTATGTCCAGCTGGGTTCCCTCCCCAACTCTGGATCTGTCCTCCCCAACAACAACCAATGCTGGATCACAGGCTGGGGGCGCACTATGACTGGGGGTCAGCTGTCCGCTGTGCTGAAGGAGGCCTACCTGCCCGTGGTGGATTACAACACCTGCTCCAGCGGCTCCTGGTGGGGCTCCACGGTCAAGAACACCATGGTGTGTGCCGGCGGTGCGGACAAGTCAGGCTGCCAGGGTGACTCTGGAGGACCCCTGAACTGTCTGGTCAATGGAGGGTACCAGGTGCATGGCGTAACCAGCTTTGTGTCGGCCAGTGGCTGCAACCAGTACAGAAAACCCACTGTCTTCACCAGGGTGTCTGCCTACATTGGCTGGATGGACAGT

Function

GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008716 True 678 mRNA 0.60 5 9527898 9529672

Neighbor

gene id symbol gene type direction distance location
AMCG00008715 NA coding upstream 2211 9488495 ~ 9525687 (+)
AMCG00008711 NA coding upstream 119140 9400486 ~ 9408758 (+)
AMCG00008712 NA coding upstream 136142 9389411 ~ 9391756 (+)
AMCG00008708 NA coding upstream 177381 9338831 ~ 9350517 (+)
AMCG00008706 NA coding upstream 218299 9290688 ~ 9309599 (+)
AMCG00008714 NA coding downstream 2119 9531791 ~ 9537457 (+)
AMCG00008720 NA coding downstream 91437 9621109 ~ 9639246 (+)
AMCG00008722 NA coding downstream 162419 9692091 ~ 9695072 (+)
AMCG00008721 LOC106566152 coding downstream 174910 9704582 ~ 9735738 (+)
AMCG00008726 LOC106514726,LOC107385311,LOC101481525,LOC103356561,LOC106928590 coding downstream 332147 9861819 ~ 9910773 (+)
G51000 NA non-coding upstream 129529 9392027 ~ 9398369 (+)
G50983 NA non-coding upstream 173493 9352978 ~ 9354405 (+)
G50932 NA non-coding upstream 333260 9194404 ~ 9194638 (+)
G50931 NA non-coding upstream 334213 9193015 ~ 9193685 (+)
G50930 NA non-coding upstream 334979 9192530 ~ 9192919 (+)
G51065 NA non-coding downstream 111084 9640756 ~ 9715167 (+)
G51094 NA non-coding downstream 262466 9792138 ~ 9794219 (+)
G51129 NA non-coding downstream 443624 9973296 ~ 9975207 (+)
G51134 NA non-coding downstream 449726 9979398 ~ 10071199 (+)
G51157 NA non-coding downstream 690561 10220233 ~ 10222915 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other upstream 148319 9355092 ~ 9379579 (+)
AMCG00008710 NA other upstream 211747 9310086 ~ 9316151 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other upstream 405086 9116675 ~ 9122812 (+)
G50900 rnf41,LOC107701697,LOC107756409,LOC107723732,LOC107671855 other upstream 439931 9081827 ~ 9087967 (+)
G50747 NA other upstream 861350 8450166 ~ 8666548 (+)
AMCG00008725 NA other downstream 385822 9915494 ~ 9937752 (+)
AMCG00008727 NA other downstream 397715 9927387 ~ 9931515 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other downstream 1162705 10692377 ~ 10771675 (+)
AMCG00008752 LOC107666323 other downstream 1298896 10828568 ~ 10846436 (+)
G51297 NA other downstream 1455218 10984890 ~ 11040674 (+)

Expression


Co-expression Network