AMCG00008736


Basic Information

Item Value
gene id AMCG00008736
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 10217338 ~ 10219366 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008736
ATGGCACCCCAGGACCACTTCATCCTGCTCCTGGTCATTATGGTCACCATGATCCTCCTGCTGATTGGAGTCATCCTAGCTGTCCTGTACTACTGCAGAGGGATCCGCCTGAAACGGAAGCGGGAGAAGCTGTCGGCCGCACGGCCCCCGGCCTACAAAGACCAGACCACCTCCACCAGCAACCTCAGCACCATCCTCAGGACGCCCACTGTGGCGCACAGCCACCTGACCCAGGCCACTTTTGTGGATGGCGATGGGTGTCGGAGCCACGGGGAGAGCCACCTGGCCACCTGTAATTCTGCCACCCTGACGAGGAACAGCCAGGGCTCCTGCAGCCTCAGCCTGGCGCACTACGATCAGGGCCACAGCCAGGACTGCAGCCGCTTTCTGGATCCGGCCGCCTCCAAGATGACGCCCTTGGGCCGCTGGAGGGCCGAGTACGAGCAGAGTCTGATGAGTGGCGTGCGGAGGATGGACGGCTCCACCGGGACGCCGGGGAGCAGTGCCCTGGCCCTGGAGAAGCCGTCTCGCTCGTTTGCTGGGGTGCAGCAGGACCGCCTGAGCTCCTCGGTGCGGAGTGGCGCTAGCCCCAAAGTGCTGCCCGTCCCCCTAGAGTCTCCCGTCGTCCTGGAAGTGTCCCACAGCAGGGCCAACAAGACGGCCAGCCTGCCCAGGGACTTGAGCTACTGCAGCGCCAGAGGAGGGTCCAGGAGCCTGCTGCTTCGGcctggggagagggagaaggggaatTCCCTGCACGGAAGCAGCTTGAATCAGGAGAGCTCGGGGGGAGGACACTCCGTGAAGGCTGAGCACTCCACGTTCTGTGGGCTGCTAGAGTCCAGCTCGGTCCCCAGCACCCTGTCCAGGCTCGAGGCAGCGGCCAGCAAGGTGGAAGGGGGAGGCCAGGTGCTGTCGGAGCAGTCGCTGCTGGAGAGAGCCAGGGCCAGCTGCCTGTTCCAGCCCCGGGCCTGGTTCATCTCGTGGGGCAACACGGCGAAGCCTGGTCCGGTGCAGCATGACGAGAACAGAGGCAGTGTGGATTCGGGGGTGGACGTGTTCGAGAACAAGGCTCTGACCCAAGTACCTGGGCACAGGGGCTCCAGAGGGGCGCGAGTGGGGCGGCCCCTGTGGAAAGGCCCCCTAGAGCAGCAGCCTGGCTCCACTGCCCAGGACGCCCCCAAGATGGAAAGAGAAGTCCGGATCAGCCCCAGGGAGGCCGCTGTGAAGCTGGGCACTCCCCAGAGCGATGGCAAGAGGACCCCTTGGCAAAAGTGGGAAGAGAGGCCCCTCATTGCAATCAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008736 True 1308 mRNA 0.65 2 10217338 10219366

Neighbor

gene id symbol gene type direction distance location
AMCG00008726 LOC106514726,LOC107385311,LOC101481525,LOC103356561,LOC106928590 coding upstream 306565 9861819 ~ 9910773 (+)
AMCG00008721 LOC106566152 coding upstream 481600 9704582 ~ 9735738 (+)
AMCG00008722 NA coding upstream 522266 9692091 ~ 9695072 (+)
AMCG00008720 NA coding upstream 578092 9621109 ~ 9639246 (+)
AMCG00008714 NA coding upstream 679881 9531791 ~ 9537457 (+)
AMCG00008738 NA coding downstream 39080 10258446 ~ 10275211 (+)
AMCG00008737 slc48a1,LOC106567162,LOC106572510,LOC105022284 coding downstream 57584 10276950 ~ 10285158 (+)
AMCG00008742 LOC107709223 coding downstream 92216 10311582 ~ 10312097 (+)
AMCG00008745 NA coding downstream 392017 10611383 ~ 10618165 (+)
AMCG00008746 tmem106c,LOC107704621 coding downstream 399360 10618726 ~ 10625169 (+)
G51134 NA non-coding upstream 146139 9979398 ~ 10071199 (+)
G51129 NA non-coding upstream 242131 9973296 ~ 9975207 (+)
G51094 NA non-coding upstream 423119 9792138 ~ 9794219 (+)
G51065 NA non-coding upstream 502171 9640756 ~ 9715167 (+)
G51000 NA non-coding upstream 818969 9392027 ~ 9398369 (+)
G51157 NA non-coding downstream 867 10220233 ~ 10222915 (+)
G51168 slc48a1,LOC106567162,LOC106572510,LOC105022284 non-coding downstream 55815 10275181 ~ 10281982 (+)
G51209 NA non-coding downstream 339273 10558639 ~ 10563099 (+)
G51210 NA non-coding downstream 345008 10564374 ~ 10564940 (+)
G51211 NA non-coding downstream 347371 10566737 ~ 10567811 (+)
AMCG00008725 NA other upstream 279586 9915494 ~ 9937752 (+)
AMCG00008727 NA other upstream 285823 9927387 ~ 9931515 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other upstream 837759 9355092 ~ 9379579 (+)
AMCG00008710 NA other upstream 901187 9310086 ~ 9316151 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other upstream 1094526 9116675 ~ 9122812 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other downstream 473011 10692377 ~ 10771675 (+)
AMCG00008752 LOC107666323 other downstream 609202 10828568 ~ 10846436 (+)
G51297 NA other downstream 765524 10984890 ~ 11040674 (+)
G51445 NA other downstream 1240997 11460363 ~ 11465488 (+)
AMCG00008784 NA other downstream 1475288 11694654 ~ 11704413 (+)

Expression


Co-expression Network