AMCG00008738


Basic Information

Item Value
gene id AMCG00008738
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 10258446 ~ 10275211 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008738
ATGACCGTTCCCCCCGGAGCAGGGCTGCGTGGAGCGGGGCAGATAACGCGGCACGGCGGCCGTCCGGGCCAGGGCAGGGGGCGAACAATCACGTGTGCCGCTGCGGAAGACAAGAACGCCTCCCAGTGCACTGTCAGCGAGGATGCAAGGCCAGCGGGAACAGCATGGTCTGAGACGGAGAGCCCCGGGGGCCAGCGGAGGGACAGGACTCTGTGTTCTTTTTCCCCAGAGCACCGATTCTTCTCAAAGCTGGTGGAGAGGAAAAGGAGGGAGGGGAGCGTGGCTGTGTTGCACTGGTACTCCAAAGCCACTGGGCCCAAGGACATGGCACAACATTCTCGCTTAAGTCGTTCAGCTCCTGGCTCTTACACAGCAGCACCGGCTCAGCAGccaatacagaaaacaggaggcTGCAGTATTGCTTATGTAGACAAGCGATATGCCAGCAAGGGATTTGCGTCCTCCAGACCAGAGGCGTCGCTGCAGGCACGTTGTCTCCCTAACCCTGGCGAGAGGGACGGGGATGTTTCTTGCCTTGGCACTTCCCCGCAGCTCGGTTGTAAACAGATGATATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008738 True 576 mRNA 0.60 6 10258446 10275211

Neighbor

gene id symbol gene type direction distance location
AMCG00008736 NA coding upstream 39080 10217338 ~ 10219366 (+)
AMCG00008726 LOC106514726,LOC107385311,LOC101481525,LOC103356561,LOC106928590 coding upstream 347673 9861819 ~ 9910773 (+)
AMCG00008721 LOC106566152 coding upstream 522708 9704582 ~ 9735738 (+)
AMCG00008722 NA coding upstream 563374 9692091 ~ 9695072 (+)
AMCG00008720 NA coding upstream 619200 9621109 ~ 9639246 (+)
AMCG00008737 slc48a1,LOC106567162,LOC106572510,LOC105022284 coding downstream 1739 10276950 ~ 10285158 (+)
AMCG00008742 LOC107709223 coding downstream 36371 10311582 ~ 10312097 (+)
AMCG00008745 NA coding downstream 336172 10611383 ~ 10618165 (+)
AMCG00008746 tmem106c,LOC107704621 coding downstream 343515 10618726 ~ 10625169 (+)
AMCG00008753 NA coding downstream 522560 10797771 ~ 10803672 (+)
G51157 NA non-coding upstream 35531 10220233 ~ 10222915 (+)
G51134 NA non-coding upstream 187247 9979398 ~ 10071199 (+)
G51129 NA non-coding upstream 283239 9973296 ~ 9975207 (+)
G51094 NA non-coding upstream 464227 9792138 ~ 9794219 (+)
G51065 NA non-coding upstream 543279 9640756 ~ 9715167 (+)
G51209 NA non-coding downstream 283428 10558639 ~ 10563099 (+)
G51210 NA non-coding downstream 289163 10564374 ~ 10564940 (+)
G51211 NA non-coding downstream 291526 10566737 ~ 10567811 (+)
G51212 NA non-coding downstream 294499 10569710 ~ 10569936 (+)
G51220 NA non-coding downstream 334535 10609746 ~ 10673784 (+)
AMCG00008725 NA other upstream 320694 9915494 ~ 9937752 (+)
AMCG00008727 NA other upstream 326931 9927387 ~ 9931515 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other upstream 878867 9355092 ~ 9379579 (+)
AMCG00008710 NA other upstream 942295 9310086 ~ 9316151 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other upstream 1135634 9116675 ~ 9122812 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other downstream 417166 10692377 ~ 10771675 (+)
AMCG00008752 LOC107666323 other downstream 553357 10828568 ~ 10846436 (+)
G51297 NA other downstream 709679 10984890 ~ 11040674 (+)
G51445 NA other downstream 1185152 11460363 ~ 11465488 (+)
AMCG00008784 NA other downstream 1419443 11694654 ~ 11704413 (+)

Expression


Co-expression Network