AMCG00008740


Basic Information

Item Value
gene id AMCG00008740
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 10183119 ~ 10193265 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008740
ATGCACATTCATCATCTGCTAATGAGTTTTCAGTTACTGCACCGCAAGCAACCCAGGCAGCAGGCGACCGCGGCGCAGCAGGagcatccctccctccctccgtcccCCTCCCCTTCCGCttcccaccccccactccccgCGCCTCGGCAGCGAAACAGCAgccccgcactacagcccgagCCCGAGCCGAGCCCGCGGGACCCAGAGGCCACCTCCACGGCACCGAGCTCAAGAGGGAGGCGGGACCCAAACCGCTCCAGGaCTGATCTCAAATGCTTTCTCGCAGACCGGGCTGTTTCCACCGCCGGGGTGCTGGGATGTGACAGGCGAGCCGCGCTGCTGAGACAGGGGTCTTCTAGCGAGACGTCAAAGCCACGCgagtgggggggtgggggggtggtctTACTGAATCTGATTTTCTTGGGAAACGCAACACATGTGGGGCATTTCGGGTCAGGCATGCCCAAGCCTTACGCGAGAAGAGACCCAACTGGGGTTGTTTTGTGCGGAGGGGCGACCGCCAGTGCCGTCTTCGCAATGGATATCAAAGTGGAATCCGAGGAACTGGATTGTAACCGTCCTGCTCCCGTGGAAGTGTTCGCCGGCTCGTCCACGCTGCACGGCATCTCGCACATCTTCACCTACGAGCGGATCTGCATCAAGCGCTGCCTGTGGGGGCTCTTCTTCCTCGGCTCGCTCGCCTTCctcgtgtgcgtgtgcgtggaCCGGGTCCAGTACTACTTCCAGTACCCGCACGTCACCAAGCTGGACGAGGTGTCCGCGCCGAGGATGCTCTTCCCGTCCGTCACCTTCTGCAACCTCAACGCGTTCCGCTTCAGCCGCGTCACCCGCAACGACCTCTATCATGCGGGGGAGCTGCTGGCTCTGCTCAACCGGCGGCGCTCCATGCACAGGGATCCACTCAGCCAGCCTGCTAGTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008740 True 942 mRNA 0.63 6 10183119 10193265

Neighbor

gene id symbol gene type direction distance location
AMCG00008734 NA coding downstream 117785 10059303 ~ 10065334 (-)
AMCG00008731 asic1 coding downstream 148522 10015724 ~ 10034597 (-)
AMCG00008730 smarcd1 coding downstream 185028 9979487 ~ 9998091 (-)
AMCG00008732 NA coding downstream 207998 9970563 ~ 9975121 (-)
AMCG00008735 NA coding downstream 217967 9951084 ~ 9965152 (-)
AMCG00008739 NA coding upstream 28155 10221420 ~ 10257851 (-)
AMCG00008743 LOC103045919,LOC106565233,LOC102299085,LOC100696631,LOC102216220 coding upstream 279265 10472530 ~ 10489766 (-)
AMCG00008747 NA coding upstream 461746 10655011 ~ 10662191 (-)
AMCG00008750 e3,LOC108429286,LOC106565226,LOC107705699 coding upstream 526227 10719492 ~ 10725176 (-)
AMCG00008751 krt8,LOC105023875,LOC107551542,LOC108411779,LOC107681390 coding upstream 570751 10764016 ~ 10771654 (-)
G51120 NA non-coding downstream 252017 9927245 ~ 9931102 (-)
G51103 LOC106928590,LOC103386378,LOC107385311,LOC106514726 non-coding downstream 272319 9909611 ~ 9910800 (-)
G51081 NA non-coding downstream 443863 9738646 ~ 9739256 (-)
G51057 NA non-coding downstream 604736 9577268 ~ 9578383 (-)
G51044 NA non-coding downstream 657432 9521354 ~ 9525687 (-)
G51243 NA non-coding upstream 475446 10668711 ~ 10673855 (-)
G51251 krt18,LOC107727028,LOC107551541,LOC100692632,LOC102212553 non-coding upstream 607843 10801108 ~ 10803709 (-)
G51261 eif4b non-coding upstream 645841 10839106 ~ 10839672 (-)
G51344 NA non-coding upstream 864412 11057677 ~ 11140273 (-)
G51354 LOC100846954 non-coding upstream 970081 11163346 ~ 11164374 (-)
G51008 NA other downstream 789892 9390843 ~ 9393227 (-)
G50788 NA other downstream 1523102 8656728 ~ 8660017 (-)
G50739 NA other downstream 1811789 8367916 ~ 8371330 (-)
G50712 tuba1c,LOC108255233,LOC108433351,LOC103467923,LOC106456382,LOC102313992,LOC107707018,LOC107557552,LOC105930792,LOC107697948,LOC102193505 other downstream 1888765 8270324 ~ 8294354 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other upstream 145060 10338325 ~ 10370316 (-)
AMCG00008744 NA other upstream 367601 10560866 ~ 10603373 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other upstream 477684 10670949 ~ 10718201 (-)
G51241 NA other upstream 482491 10675756 ~ 10712485 (-)
G51250 NA other upstream 604367 10797632 ~ 10799154 (-)

Expression


Co-expression Network