AMCG00008745


Basic Information

Item Value
gene id AMCG00008745
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 10611383 ~ 10618165 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008745
TTCTCTCTTCCTGTATTTAATCCCACAGCTTCTGAGATCTGAAAACTTCAACTTCACTTTAATGACAGAGCCTGAGTTAGGATTAGGGTTTATGTGAGACTTTTGGCTGAGGCTTGGGACGGCCTACAGAAATGAAAAGGAGAGGTTAAGATGACTCCCTTAGAGGATGACGAGATCTATTTCACAGTCAAGATGTCTGAGGGCTCCGTGGCcagcaaactgaaaaacaagcaTCGCAAGACATCTCTGTTTCTGTCCATCAGTGGGATTGACATCCTGGACCACAAAACCAAGTTCATGCTGCACAGCTGCCCTCTGTCCACCATCTCCTTCTGCGCAGTGCACCAGACCATGCCCAACCTCTTTGGCTTCATCTCCAAGGGCTCTGCAGGCAAGGGCCACTACTGCTACCTGTTCAAGAGCACCAAGTTCTCCCATTTGCTGGTGTCCATCATCGGAGAAGCATTCTATGCCGCTAAGGGCCGAGAGGACTTCGGGGGAGACAAGGACCTGATGGTTGAATCCCTGAGACACAAGAATAAGATACTGCAGAAGGAGAACACCATGCTGAAAAAGAAGATTGCCAAGATGGAGGAGAAAATGGATGCCAACAAGGGCTAATTTCACTGGGTGGCTTAAAAAGCAGTGGGATGGGGATAATTTTATGTTTCACAGCCTTCTTAAGCGGATCACTTAAGCACTTAACACAGACCTGTTTGCCATCGCTCAGCTTTGCGGTGTCTGTCTCTTTTGGTTGCACTAGTCACCTATCACAGTCAACAACTGAAGACTCGttgtgggagaaaaaaaagttgtcatGCAATTTAGCATATTGGTTTTGCCCTGAGATGAACTTGAATACTGTTGGTACTGTAAATAGAAAGTGTCCTCGTTCACAACTCCCATCGCATTGTCCCAGTGACTCAGTGACCTGTGACCGATGCCAGTCCCACTCAATCTgaccccctctccctgtctgcTCTCTCCCTATCAGGGAACAGACAGGAGACCTCCAACAGTATTCAGAAACCAAATTGCACCAGAGAGTGTCCCTTCATCCTCCCAAAGCTGAGTAGGGCAAATATATCACACAGGGTGACATGGTGGGTATACAGGTCGAAATAAAGTCCAGTGAAAGTGCATGACAGAGTGCTAGAGTCAGAAATTGCCTATAAATAATTAGTCAAAACTGAATCGAGGACCAATCTGTACCCTGTTGATTTAGTTTATTCCTTAACAAGAAAATGGCCTCTGACAAGAAAGTAATTCAACCAATATGGGAAGcaggtttttttaatttgcattatttggGTAGGgttgatgttttgatttggtccaggcctaaGTATCATTTGAAGTCAGGCTGTACAGCAGATCTAATGAAAAGAGGCCGGAAGGGTGTAATGCCTCTTGTCATTCTAAAGCTTAATTgtgtcatcatcatcaatattgGATCTTCTCATCATCCCAGGAGTGATGAGCAGAACTTCCCAAATAAAGGACAGGGGAAGTTCAGATTCCCATATAGCAATGCCTGACACACAGAGGAATCCACAGCTACCATATTGACAAATCAGTCATGACACTTTCACAGCACGTAGCTGACAATGGGGCTCACTCCCCGAAATgtgaaatcatattttttagGGTTTGAGATTTTGTTATGAGGTTTTATGAGGTTGAGAGATATGTACTTATTAATTTTCATCAAACAAACTGACTTGTGATTGCATGGTTGTTCAAACTGAGGGGTTCACAAAACGTTGTCTATGAAAGGTGGACCCATCCTTGCCTTCTGATcaataaacagattaaaaatacatttgattattttcctcCCTAGAATTAGCATGTCAAGGTGAGAATGATTGAAGACCTCACTCTGAATCGCTGGGCAGAACCAAGACAATCTGCATATGGGTTGTGGTCACTTGACTCACCTACATAGAACCTTTCAATGTATTCTGTACTTCCTCTTTCTTACTGCATTTATGGTGTATTGTATGTTCTTGCTCTTCTTgtgttatatttcttaaaatgtgtatattgtgtgaCAAATAAAGTCGGTAAAGGATTctactattaaataaaataatcataatcaatcCAATATGTTTTCACCCAAAGCAAGAAATCTGAATATTAATCAAGCAAACAATGTCAGAGCTAAAATAGGCTTGATTACTTGATTGCAGTTTCCAGCATAGTGGATTTTTTTTCAGTCTACTAACCTCTTGACTCTTGACCACAATATGTATCCTGATTGGACCTCTGGGCTCCTGTATTCCTGTGAGGCTACTGAGATTGTACTCTCTCCTGCATGCTCAGAGCTCTATACCTGAGATAGCTACACTCTCTTCCAATTGTATTACCCTCTCAATGGCACACCCTTCCAGTCACTAGACTGTAAACTAGTTTTTACTAGTTTACTAGTTAAACTAGGTTTTACActagtttattttataactaCTCTGTTCCCCAGCCTCCTGTCTACAAAGGGCATCCTGAAGAATCCACTATGTAAATGCTGGAGACAGTCCTTTACATCTGCTTAATGTAAATGTCAGGAGgtaatttttaattgtatttgtattttttttttttttt

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008745 True 2607 mRNA 0.42 6 10611383 10618165

Neighbor

gene id symbol gene type direction distance location
AMCG00008742 LOC107709223 coding upstream 299286 10311582 ~ 10312097 (+)
AMCG00008737 slc48a1,LOC106567162,LOC106572510,LOC105022284 coding upstream 326225 10276950 ~ 10285158 (+)
AMCG00008738 NA coding upstream 336172 10258446 ~ 10275211 (+)
AMCG00008736 NA coding upstream 392017 10217338 ~ 10219366 (+)
AMCG00008726 LOC106514726,LOC107385311,LOC101481525,LOC103356561,LOC106928590 coding upstream 700610 9861819 ~ 9910773 (+)
AMCG00008746 tmem106c,LOC107704621 coding downstream 561 10618726 ~ 10625169 (+)
AMCG00008753 NA coding downstream 179606 10797771 ~ 10803672 (+)
AMCG00008754 NA coding downstream 276877 10895042 ~ 10906610 (+)
AMCG00008755 NA coding downstream 292962 10911127 ~ 10929774 (+)
AMCG00008758 NA coding downstream 320074 10938239 ~ 10949947 (+)
G51212 NA non-coding upstream 41447 10569710 ~ 10569936 (+)
G51211 NA non-coding upstream 43572 10566737 ~ 10567811 (+)
G51210 NA non-coding upstream 46443 10564374 ~ 10564940 (+)
G51209 NA non-coding upstream 48284 10558639 ~ 10563099 (+)
G51168 slc48a1,LOC106567162,LOC106572510,LOC105022284 non-coding upstream 329401 10275181 ~ 10281982 (+)
G51226 NA non-coding downstream 57400 10675565 ~ 10712485 (+)
G51252 NA non-coding downstream 185741 10803906 ~ 10804107 (+)
G51265 NA non-coding downstream 249770 10867935 ~ 10910645 (+)
G51283 NA non-coding downstream 332912 10951077 ~ 10953420 (+)
G51298 NA non-coding downstream 402051 11020216 ~ 11057436 (+)
AMCG00008725 NA other upstream 673631 9915494 ~ 9937752 (+)
AMCG00008727 NA other upstream 679868 9927387 ~ 9931515 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other upstream 1231804 9355092 ~ 9379579 (+)
AMCG00008710 NA other upstream 1295232 9310086 ~ 9316151 (+)
AMCG00008696 nabp1,LOC106565411,LOC106575791,LOC107675336 other upstream 1488571 9116675 ~ 9122812 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other downstream 74212 10692377 ~ 10771675 (+)
AMCG00008752 LOC107666323 other downstream 210403 10828568 ~ 10846436 (+)
G51297 NA other downstream 366725 10984890 ~ 11040674 (+)
G51445 NA other downstream 842198 11460363 ~ 11465488 (+)
AMCG00008784 NA other downstream 1076489 11694654 ~ 11704413 (+)

Expression


Co-expression Network