AMCG00008755


Basic Information

Item Value
gene id AMCG00008755
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 10911127 ~ 10929774 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008755
ATGTTTGTCTTTCCGCAGCTCCGCCGTGCTTTAGGCCCAAGTGTCGTCGCTGTTTCCCGCTTTAGTAAACGGGGCTTTGTCCCAACAACCTCCCGTCGTTTTACGTCGCGGCAAACCTCCACGACCGACGTCCGGAAATACCACATGCAATCGCCCGCAGCAAAGCGCTCCTGTGGTCTGAAGATGCCGGCGCCTCGGATCGGCACGCACAACGGGACATTTCATTGCGATGAGGTGCTGGCGTGCTTCTTTCTCCGGCAATTACCGGAGTATAAGGATGCGGAAATCATTCGAACCCGGGACCCTGCCCAGCTGGCCGAGTGTGACGTGGTGGTGGATGTGGGCGGAGAGTTTGATCCGAAACGCCACCGTTATGACCACCACCAGAGGTCGTTCTGCGATTCCTTCAGCAGCCTGTGCCCAGAGAAGAAGTGGGTGACCAAGCTGAGCAGCGCTGGCCTTGTCTACCTCCACTTTGGGCACCGCATCTTGGCACAGCTGACCCAGCAGGAAGAAGGGACACCCAGTCTGGAGCTGTATGAGAACTTCGTGGAGGAGATCGACGCCATCGATAACGGGATCTCCCAGTGGGACGGCGAGCCGCGCTACGCCATGACCACCAACCTGAGTGCCCGTGTGGGGCACCTCAACCCCCGCTGGAACGACAAGAGCCAGGACACAGAGGAGGGGTTCAAGAAAGCTATGGAGATGGTGGGCACTGAATTTCTGGACAGGGTCGACTTTTACCAGCGTTCCTGGCTTCCAGCCCGGGCCCAGGTGGAGGAAGCCGTTCGAACCCGAGCTGAGGTGGACCCCAGTGGGGAGGTGGTGGTGCTGGGACAGGGGGGCTGTCCCTGGAAGGAGCACCTGTTCAGCCTGGAGGAAGAGCTGGCTATGGAGACGCCCATCAAGTTTGTGCTTTACCCAGACCAGAGCAGCCAGTGGAGGGTGCAGTGTGTGCCCGCCGGCCTGCACACCTTCCAGAACAGGCTGTCTCTGCTGGAGGAGTGGCGAGGAGTGCGGGACGAGGCCCTCTCTTCCCTCAGCGGCATCCCCGACTGCATCTTCGTCCACGCCAGTGGCTTCATCGGTGGCAACCGCACGAAGGAGGGAGCTCTGGAGATGGCGCGGCGTACCCTGCGGGCGGTCGCGGACGCTACCCCAGCCAATGGCAGCTGACGTTAGAGGGCGAGAAGAAAGCTTGGCCCCCTCGCTCGGGCTAGGGTGGGCCAGGGGGCGAGACTGTGTATCtccatgtttatgttttt

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome
ko03030 DNA replication

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008755 True 1268 mRNA 0.61 7 10911127 10929774

Neighbor

gene id symbol gene type direction distance location
AMCG00008754 NA coding upstream 4517 10895042 ~ 10906610 (+)
AMCG00008753 NA coding upstream 107455 10797771 ~ 10803672 (+)
AMCG00008746 tmem106c,LOC107704621 coding upstream 285958 10618726 ~ 10625169 (+)
AMCG00008745 NA coding upstream 292962 10611383 ~ 10618165 (+)
AMCG00008742 LOC107709223 coding upstream 599030 10311582 ~ 10312097 (+)
AMCG00008758 NA coding downstream 8465 10938239 ~ 10949947 (+)
AMCG00008757 NA coding downstream 20240 10950014 ~ 10950787 (+)
AMCG00008759 NA coding downstream 67796 10997570 ~ 11017498 (+)
AMCG00008760 NA coding downstream 122968 11052742 ~ 11061279 (+)
AMCG00008768 NA coding downstream 185250 11115024 ~ 11122159 (+)
G51265 NA non-coding upstream 482 10867935 ~ 10910645 (+)
G51252 NA non-coding upstream 107020 10803906 ~ 10804107 (+)
G51226 NA non-coding upstream 198642 10675565 ~ 10712485 (+)
G51220 NA non-coding upstream 237343 10609746 ~ 10673784 (+)
G51212 NA non-coding upstream 341191 10569710 ~ 10569936 (+)
G51283 NA non-coding downstream 21303 10951077 ~ 10953420 (+)
G51298 NA non-coding downstream 90442 11020216 ~ 11057436 (+)
G51446 NA non-coding downstream 536038 11465812 ~ 11466083 (+)
G51483 NA non-coding downstream 782938 11712712 ~ 11716482 (+)
G51582 NA non-coding downstream 1132300 12062074 ~ 12062289 (+)
AMCG00008752 LOC107666323 other upstream 64691 10828568 ~ 10846436 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other upstream 139452 10692377 ~ 10771675 (+)
AMCG00008725 NA other upstream 973375 9915494 ~ 9937752 (+)
AMCG00008727 NA other upstream 979612 9927387 ~ 9931515 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other upstream 1531548 9355092 ~ 9379579 (+)
G51297 NA other downstream 55116 10984890 ~ 11040674 (+)
G51445 NA other downstream 530589 11460363 ~ 11465488 (+)
AMCG00008784 NA other downstream 764880 11694654 ~ 11704413 (+)
AMCG00008810 NA other downstream 1609824 12539598 ~ 12549618 (+)
G51734 NA other downstream 1785720 12715494 ~ 12716786 (+)

Expression


Co-expression Network