AMCG00008759


Basic Information

Item Value
gene id AMCG00008759
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 10997570 ~ 11017498 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008759
ATGGCCTGCATCCACGAGACCCGAgccccctccccatctctctcggGCTTCAGCACGCCCCTGTCCGAGCCCCCTTTCCGCCGGCTGGACCCCGACACTCCAGCCTGCACCCCCGAGATGGACCTGACACCCACCCAATGTGTGTTGCGCAACGTACTGTCTATCGACACAGGAGCGGGGTTGGGTGGCGGCGGTGGAGGCAGCGGAGGGGGATGCCATCACAGCCCCACGCCCAGTGATGAGCCCCCCGAACACTTTGCCAACAGCGTGCTTAAGCTACATGAGAACGAGGCCGGGGGCGGGGCGGAAGCGGGGCACAATGCAGAAGGCGGGGCAGTCAGGGGCCAATCAGACGACTGCCAGTCTGGGGGCGGCTTCCTGGAGGGCCTGTTTGGCTGCCTGAAGCCGGTGTGGACCATGATCGGAAAGGCCTACTccactgaacacaaacacaaccacGAAGAGTTGTGGGAGGTGCCCTTTGAGGAGATCTCTGACCTGCAGTGGGTGGGCAGTGGTGCCCAGGGGGCCGTGTTCCTGGGGAAGTTCCACGGGGAGGAAGTGGCAGTGAAGAAGGTGCGCGACATCAAGGAGACGGACATCAAGCACCTGCGCAAGCTCAAGCACCCCAACATCATCACTTTCAAgGGTGTATGCACCCAGGCACCCTGCTATTGCATCATCATGGAGTACTGTGCCCAGGGCCAGCTGTACGAGGTTCTGAGAGCCGGGCGCAAGATCACCCCATCACTGCTGGTGGACTGGTCCATGGGCATCGCTGGGGGCATGAACTACCTGCACCTCCACAAGATCATCCACCGAGACCTCAAGTCACCCAACATGCTGATCACCTATGATGATCTGGTGAAGATCTCAGACTTTGGCACCTCCAAGGAGCTAAGTGACAAGAGCACCAAGATGTCCTTTGCGGGGACAGTGGCCTGGATGGCACCTGAGGTGATCCGCAACGAGCCGGTGTCAGAGAAAGTGGACATCTGGTCATTCGGGGTGGTCCTGTGGGAGATGCTGACAGGAGAGATCCCCTACAAGGACGTGGACTCCTCTGCCATCATCTGGGGCGTGGGCAACAACAGCCTGCAGCTGCCTGTGCCTGAGAGCTGCCCCGACGGCTTCAAGATCCTGCTGAGGCAGTGTTGGAACTGTAAACCCAGGAACAGGCCCTCTTTCCGGCAGATTCTCCTCCACCTGGACATCGCCTCCGCAGACGTCCTATCCACCCCTCAGGAGACCTACTTCAAATCCCAGGCGGAGTGGCGCGAGGAGGTGAAGCAGCACTTTGAGAAGATCAAGTCTGAGGGCACCTGTCTGCACCGGCTGGACGAGGAACTCATCAACCGACGCAGAGAGGAGCTCAGAGCCAACAACCTGTACATGGAGCTCAACGCTGTCATGCTGCAGCTGGAGCTCAAGGAGAAGGAGCTGATGAGGAGAGAGCAGTCTCTGGATAAGAAGTACCCCGGGCTCTTCAAGCACCACAGCTCGCGCCAGGGCGGCCCCTCCAACTCCATGGAGAAGCTCATCAAGAAGCGCAACGTCCCACAGAAGCTGCCCTCGCACAGCAAACGGCCAGACATCCTGAAATCAGAGGTGATCCTGCCTAAGCTGGACTCCTCCATGACACAGGTCACCATCCCCTCCTGCCCCAACAAGGGCTCCACCTCGCCAGGCCGCTCGCGAAGAGGCAAGACCCGTTATAGGAAGGCAGGCGGCAAGGGCAGCAGTGGGGACCTGGCGGGGCTGAAGGCTGCCCTGGCGCCCCCGTGCCGCGACCCCACCAACCCACTGCCAACCAAGCACCTGGACCCCAGCGCCGCCTTGCGGGGGCTGCAGCACGACCTACTGCTGAAGAAGATGTCCAACTCCAGTCCCGACCTTATCTCCACCACCCTGGAAGCCGAGGGACGAAACAAGGGGGACAGGGGCAGTCTCAGCGCCTCGGCGGGCCTGGCGGGGGCCGGAGGTGGGGAGGAAGCGGCGGAGGCTGGTGGTGGCGCCGACGACCTCACCGAGACCCCACCACGCAGTGACACGCCCAGCGAGGACGCTGCCTCCATCCCTTTCTCCAGCAGCCCCGATTCGCCCTGCGGGAGAGGCGGGGCGACGGGGCGGGGCTCTGTGCTGGGGTCACCCCGCCTCCCGCAGGATGgggaggagaaggaagagggGCCGGGGGTCAGCCGGGCACCCAGGGGAGGAGCCGGGGGCAGCGGGCAGCAGCACCTGACTCCCGCAGCCATCCTGTACAGAGCCGCCGTCACACGGAAACAGAAGAGGGGCGTGTcatcagaggaggaggagggggaggtggaCAGTGAGGTGGAGTTGCCACGGAGACAGAGGAGGCCCGCCGGCATGAGCAAATGCCAGTCGCTGTCCACCTTCAGCTCGGAGAACCTGTCTGTGTCCGACGGCGAGGAGGGCAACACCAGTGACCACTCCCACAGCGGCACGCCAGACGTGGTCAGCACCAACACGGACGAGCGGCTGGACGACAAGTCAGACGACCTGCTGTCCCAGAGCTCCGAGATCCCGGTGGACGCGCTGCAGCAGTCGGACGGGCTGTCCGAGAAGGAGGCAGCGGTGCGAGAGGTCAAGACTCAGCTGAACGCAGAGCACAACACCTACGAGATCCCGTCCCACTACGACGACTCCGACTGCGACAGCGCCGAGCTGGACCACTCAGGCAGCGCGGAGGCCAGCCACCCCTCCAGCACCGTCACTTGGTGA

Function

GO: NA

KEGG:

id description
K04423 MAP3K12, MUK; mitogen-activated protein kinase kinase kinase 12

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008759 True 2748 mRNA 0.63 14 10997570 11017498

Neighbor

gene id symbol gene type direction distance location
AMCG00008757 NA coding upstream 46783 10950014 ~ 10950787 (+)
AMCG00008758 NA coding upstream 47623 10938239 ~ 10949947 (+)
AMCG00008755 NA coding upstream 67796 10911127 ~ 10929774 (+)
AMCG00008754 NA coding upstream 90960 10895042 ~ 10906610 (+)
AMCG00008753 NA coding upstream 193898 10797771 ~ 10803672 (+)
AMCG00008760 NA coding downstream 35244 11052742 ~ 11061279 (+)
AMCG00008768 NA coding downstream 97526 11115024 ~ 11122159 (+)
AMCG00008769 NA coding downstream 126524 11144022 ~ 11152563 (+)
AMCG00008770 NA coding downstream 165719 11183217 ~ 11189156 (+)
AMCG00008771 NA coding downstream 171924 11189422 ~ 11197752 (+)
G51283 NA non-coding upstream 44150 10951077 ~ 10953420 (+)
G51265 NA non-coding upstream 86925 10867935 ~ 10910645 (+)
G51252 NA non-coding upstream 193463 10803906 ~ 10804107 (+)
G51226 NA non-coding upstream 285085 10675565 ~ 10712485 (+)
G51220 NA non-coding upstream 323786 10609746 ~ 10673784 (+)
G51298 NA non-coding downstream 2718 11020216 ~ 11057436 (+)
G51446 NA non-coding downstream 448314 11465812 ~ 11466083 (+)
G51483 NA non-coding downstream 695214 11712712 ~ 11716482 (+)
G51582 NA non-coding downstream 1044576 12062074 ~ 12062289 (+)
G51584 NA non-coding downstream 1057990 12075488 ~ 12077513 (+)
AMCG00008752 LOC107666323 other upstream 151134 10828568 ~ 10846436 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other upstream 225895 10692377 ~ 10771675 (+)
AMCG00008725 NA other upstream 1059818 9915494 ~ 9937752 (+)
AMCG00008727 NA other upstream 1066055 9927387 ~ 9931515 (+)
AMCG00008707 tfcp2,LOC107715039,LOC107671887,LOC106572516 other upstream 1617991 9355092 ~ 9379579 (+)
G51445 NA other downstream 442865 11460363 ~ 11465488 (+)
AMCG00008784 NA other downstream 677156 11694654 ~ 11704413 (+)
AMCG00008810 NA other downstream 1522100 12539598 ~ 12549618 (+)
G51734 NA other downstream 1697996 12715494 ~ 12716786 (+)
G51756 NA other downstream 1825217 12842715 ~ 12846233 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000350_00324715_00343520 MAP3K12 coding CI01000350 null 324715 ~ 344278 (+)