AMCG00008761


Basic Information

Item Value
gene id AMCG00008761
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 11038302 ~ 11044119 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008761
GGAAGTGTTTATAAtgtgctgattttgtttttctttccacatgGATGTGACAGTTGATCTGACCGCTGTGCAGGGACGCTGTTCCAGTTCCGCCCGGACCTCCGACCCCAGGCTGCCGCGGCGCTCAGTACATAAGGGGCGGGGATTGAAGCAGCACTGTATCCGGAAGAACCGCGGCTTGTCATCGAGCTGCAACCCTGATCTCGCACCTCTTTCTGGAGACGAGCTAGTGAGGAAAGAAGAGATATGTGGCCAAATCAAGGGCAGCAGCCAGGGGGATATCCCATGGGTCCGCCGCCCCCCAACCCTAACTATCCTCCAGGCCACGACCCAGCCTACCCACCAGGAGCAAACCCAGCCTTCCCTCCTGCTGTCAACCCCCAATTCCCAGGCCCCTACCCCGTGCCTCCAGGTGGCATGCCAGGCCAGCAGCCTTACCACCCTGGCCCTGGGACCTATCCAGGAGTCCCCGCCTGTCCCCCTGGGTATCCTGGGGTCAACCCCGCTTACCCAGCCCCACCTGGTGGGGTCCTCCCAGGCCCCTATCCCACTGGGTACCCAGTAGACCATCACGGCAAAGGCCACAAGCACGGAAAACACTATCCCATGGCACCCGGCATGGCAGGGGGATTAGCTGGGGGGCTGGCGGGGGTTGGCATGGTGATGGGAGGGCACAAGGCACacaagaagatgaagaagaagatgaagaaggaCCACAAGTACCATAAGCATGGGAAGCAttcctccagcagcagcagcagcagcagcgactCGGACTGACCATCACTCTTGACGCTGACGCGGAGTCGCAGACCAGTCCAGACAATCGCCGATCAGGACTGCAGCTCCCTGTTCAAAAGATATTGCATATGGGCTTTTGCAGAACGGGTTCACACACTGTCCTCCGGGGGCTGCCCACTACAACACATTCCCCTGACGCCTCACGTTTAGCAAGTGAGAAGGCAGATTTTCCGTTGCGTAATATTTCGGGCTTCTCTGAGGACACCCCTGGATGCCACTGTAAGTCCCACTGTGCTACTGACTATATAACTGCTTTCTTTTATCTAAtctatatatgaatgtatatgtataatctTATAAAGAGGGCGAGTGTGAAATTATCTGTAGATAATGgaagaaagctttttttttttttttttttcttcctcatatTATAAGATACATTCACATCCAGTTTTAACCAAACACAGCATTCCAATTTGAATCAGTTCCCCGgacatcaataaattaataacttcAAAGGCTTTTTTGTGGCGTCCCTTTTTCTGCCAGTCTAGCACAAAtttgcacaaataaaatgtggggggtggtggagggggaAGGGAAAATTCTCAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008761 True 1358 mRNA 0.53 4 11038302 11044119

Neighbor

gene id symbol gene type direction distance location
AMCG00008763 pcbp2,LOC100691124,LOC103464415,LOC106956729 coding downstream 2575 11021548 ~ 11035727 (-)
AMCG00008765 NA coding downstream 26731 11004156 ~ 11011571 (-)
AMCG00008756 NA coding downstream 65923 10958584 ~ 10972379 (-)
AMCG00008751 krt8,LOC105023875,LOC107551542,LOC108411779,LOC107681390 coding downstream 266648 10764016 ~ 10771654 (-)
AMCG00008750 e3,LOC108429286,LOC106565226,LOC107705699 coding downstream 313126 10719492 ~ 10725176 (-)
AMCG00008764 NA coding upstream 844 11044963 ~ 11051426 (-)
AMCG00008762 NA coding upstream 18168 11062287 ~ 11073591 (-)
AMCG00008767 NA coding upstream 90067 11134186 ~ 11143361 (-)
AMCG00008766 NA coding upstream 106800 11150919 ~ 11171928 (-)
AMCG00008772 NA coding upstream 166067 11210186 ~ 11221258 (-)
G51261 eif4b non-coding downstream 198630 10839106 ~ 10839672 (-)
G51251 krt18,LOC107727028,LOC107551541,LOC100692632,LOC102212553 non-coding downstream 234593 10801108 ~ 10803709 (-)
G51243 NA non-coding downstream 364447 10668711 ~ 10673855 (-)
G51120 NA non-coding downstream 1107200 9927245 ~ 9931102 (-)
G51103 LOC106928590,LOC103386378,LOC107385311,LOC106514726 non-coding downstream 1127502 9909611 ~ 9910800 (-)
G51344 NA non-coding upstream 13558 11057677 ~ 11140273 (-)
G51354 LOC100846954 non-coding upstream 119227 11163346 ~ 11164374 (-)
G51403 NA non-coding upstream 182368 11226487 ~ 11258218 (-)
G51574 NA non-coding upstream 958806 12002925 ~ 12010394 (-)
G51588 NA non-coding upstream 1037093 12081212 ~ 12093785 (-)
G51250 NA other downstream 239148 10797632 ~ 10799154 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other downstream 320101 10670949 ~ 10718201 (-)
G51241 NA other downstream 325817 10675756 ~ 10712485 (-)
AMCG00008744 NA other downstream 434929 10560866 ~ 10603373 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other downstream 667986 10338325 ~ 10370316 (-)
AMCG00008777 dctn2,LOC102785932 other upstream 191523 11235642 ~ 11326359 (-)
AMCG00008815 NA other upstream 1557172 12601291 ~ 12605260 (-)
G51797 NA other upstream 1846692 12890811 ~ 12891597 (-)
G51799 NA other upstream 1851216 12895335 ~ 12897134 (-)
G51867 NA other upstream 1956707 13000826 ~ 13001888 (-)

Expression


Co-expression Network