Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00008768 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 11115024 ~ 11122159 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| id | description |
|---|---|
| K09197 | SP7; transcription factor Sp7 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00008768 | True | 849 | mRNA | 0.61 | 3 | 11115024 | 11122159 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008760 | NA | coding | upstream | 53745 | 11052742 ~ 11061279 (+) |
| AMCG00008759 | NA | coding | upstream | 97526 | 10997570 ~ 11017498 (+) |
| AMCG00008757 | NA | coding | upstream | 164237 | 10950014 ~ 10950787 (+) |
| AMCG00008758 | NA | coding | upstream | 165077 | 10938239 ~ 10949947 (+) |
| AMCG00008755 | NA | coding | upstream | 185250 | 10911127 ~ 10929774 (+) |
| AMCG00008769 | NA | coding | downstream | 21863 | 11144022 ~ 11152563 (+) |
| AMCG00008770 | NA | coding | downstream | 61058 | 11183217 ~ 11189156 (+) |
| AMCG00008771 | NA | coding | downstream | 67263 | 11189422 ~ 11197752 (+) |
| AMCG00008774 | LOC106566145,LOC107558166 | coding | downstream | 157753 | 11279912 ~ 11291300 (+) |
| AMCG00008775 | NA | coding | downstream | 209716 | 11331875 ~ 11336221 (+) |
| G51298 | NA | non-coding | upstream | 57588 | 11020216 ~ 11057436 (+) |
| G51283 | NA | non-coding | upstream | 161604 | 10951077 ~ 10953420 (+) |
| G51265 | NA | non-coding | upstream | 204379 | 10867935 ~ 10910645 (+) |
| G51252 | NA | non-coding | upstream | 310917 | 10803906 ~ 10804107 (+) |
| G51226 | NA | non-coding | upstream | 402539 | 10675565 ~ 10712485 (+) |
| G51446 | NA | non-coding | downstream | 343653 | 11465812 ~ 11466083 (+) |
| G51483 | NA | non-coding | downstream | 590553 | 11712712 ~ 11716482 (+) |
| G51582 | NA | non-coding | downstream | 939915 | 12062074 ~ 12062289 (+) |
| G51584 | NA | non-coding | downstream | 953329 | 12075488 ~ 12077513 (+) |
| G51586 | NA | non-coding | downstream | 956538 | 12078697 ~ 12080204 (+) |
| G51297 | NA | other | upstream | 74350 | 10984890 ~ 11040674 (+) |
| AMCG00008752 | LOC107666323 | other | upstream | 268588 | 10828568 ~ 10846436 (+) |
| AMCG00008749 | krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 | other | upstream | 343349 | 10692377 ~ 10771675 (+) |
| AMCG00008725 | NA | other | upstream | 1177272 | 9915494 ~ 9937752 (+) |
| G51445 | NA | other | downstream | 338204 | 11460363 ~ 11465488 (+) |
| AMCG00008784 | NA | other | downstream | 572495 | 11694654 ~ 11704413 (+) |
| AMCG00008810 | NA | other | downstream | 1417439 | 12539598 ~ 12549618 (+) |
| G51734 | NA | other | downstream | 1593335 | 12715494 ~ 12716786 (+) |
| G51756 | NA | other | downstream | 1720556 | 12842715 ~ 12846233 (+) |
