Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00008775 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 11331875 ~ 11336221 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0046890 | regulation of lipid biosynthetic process | biological_process |
| GO:0070059 | intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00008775 | True | 761 | mRNA | 0.61 | 5 | 11331875 | 11336221 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008774 | LOC106566145,LOC107558166 | coding | upstream | 40575 | 11279912 ~ 11291300 (+) |
| AMCG00008771 | NA | coding | upstream | 134123 | 11189422 ~ 11197752 (+) |
| AMCG00008770 | NA | coding | upstream | 142719 | 11183217 ~ 11189156 (+) |
| AMCG00008769 | NA | coding | upstream | 179312 | 11144022 ~ 11152563 (+) |
| AMCG00008768 | NA | coding | upstream | 209716 | 11115024 ~ 11122159 (+) |
| AMCG00008778 | NA | coding | downstream | 33492 | 11369713 ~ 11392029 (+) |
| AMCG00008783 | r3hdm2 | coding | downstream | 231637 | 11567858 ~ 11599637 (+) |
| AMCG00008782 | LOC107563942 | coding | downstream | 266194 | 11602415 ~ 11618855 (+) |
| AMCG00008787 | NA | coding | downstream | 497065 | 11833286 ~ 11834344 (+) |
| AMCG00008791 | NA | coding | downstream | 646557 | 11982778 ~ 12002806 (+) |
| G51298 | NA | non-coding | upstream | 274439 | 11020216 ~ 11057436 (+) |
| G51283 | NA | non-coding | upstream | 378455 | 10951077 ~ 10953420 (+) |
| G51265 | NA | non-coding | upstream | 421230 | 10867935 ~ 10910645 (+) |
| G51252 | NA | non-coding | upstream | 527768 | 10803906 ~ 10804107 (+) |
| G51226 | NA | non-coding | upstream | 619390 | 10675565 ~ 10712485 (+) |
| G51446 | NA | non-coding | downstream | 129591 | 11465812 ~ 11466083 (+) |
| G51483 | NA | non-coding | downstream | 376491 | 11712712 ~ 11716482 (+) |
| G51582 | NA | non-coding | downstream | 725853 | 12062074 ~ 12062289 (+) |
| G51584 | NA | non-coding | downstream | 739267 | 12075488 ~ 12077513 (+) |
| G51586 | NA | non-coding | downstream | 742476 | 12078697 ~ 12080204 (+) |
| G51297 | NA | other | upstream | 291201 | 10984890 ~ 11040674 (+) |
| AMCG00008752 | LOC107666323 | other | upstream | 485439 | 10828568 ~ 10846436 (+) |
| AMCG00008749 | krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 | other | upstream | 560200 | 10692377 ~ 10771675 (+) |
| AMCG00008725 | NA | other | upstream | 1394123 | 9915494 ~ 9937752 (+) |
| G51445 | NA | other | downstream | 124142 | 11460363 ~ 11465488 (+) |
| AMCG00008784 | NA | other | downstream | 358433 | 11694654 ~ 11704413 (+) |
| AMCG00008810 | NA | other | downstream | 1203377 | 12539598 ~ 12549618 (+) |
| G51734 | NA | other | downstream | 1379273 | 12715494 ~ 12716786 (+) |
| G51756 | NA | other | downstream | 1506494 | 12842715 ~ 12846233 (+) |
