AMCG00008787


Basic Information

Item Value
gene id AMCG00008787
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 11833286 ~ 11834344 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008787
ATGTCGTATTCTAACAGCTCCTGTGTCGAGAACGGCACAGCCTACCCAGAGGAGACCAACATGGACGTCAACATCTCGCAAATAGTGGTGCCCGTGCTGGACGCCCTGATCCTGGCCACAGGAGTGGTGGGCCATTCCCTGGTGGTGCTGATCCTGACCCGGAGGCGAAGTAGCAGCCAGCGTCGCCACGGCACTGACACCCTCCTGCTGACACTGAGCGTGGCTGACCTGCTGCAGCTGGCCTGCCTACCCTTCAACACGGCCGCCATTGCAATGGGGCGCTGGCCCTTTGGCATCGTCCTATGCAAGATGATCAGCTTCCTGGGTGTGGCCTGCTCGTCCACCAGCGTGTTCACCCTGGCCGCTCTGGCAGTGTCCCGCTACCTCACCGTGGTGTACCCGACCTGGGCATACCGGTCCTGGCTGAACAGACACAGCTGGGTGACGGTGGCGGCACTGTGGCTTCCCACAGTGGCCCTGGCCTCGCCCCAGTTCGTGTACCGCACCGTGCGCTCCGGCAGTGCCGTGTACTGCTTCGCCTTCCTGTCCGACGTCAGCCAGCTGGTGTACGGAGCCGCCCTTTTCCTGTTCGGCTTCGTCGTGCCCCTGGCCATCATCGTGGTCATGTACGGCCGCCTCTACAGCTTCCTGCGGCGCACGCGTCAGGCCGGCCATGCCCCCCAGCTGGAGCGCTACCAGAGCCAGGTGACACGCACGTCGGCCCTGCTGGTGCTGGTGTTCACAGTGTGCTGGCTGCCATCCTACGTGCTCATGTTCTCGCTGGTGGGCTACACCTTCAGCGAACACAGCTACCATGCCTTCCCCATCTTCGCACGGCTGCTGGCCTGCTCCTCCACCGTGACCAACCCCATCCTGTACGTCTTCATCTCCGGCAAGTTCAGGAAGGACCTGGCGTCGCTGGCTGGCCGGGGGAGGGGGTGTGGTTGCTGTGGTTGCCCCGAGTGGGGCAGGGACACTGTCAATCCCTTAAACTCTGTGGAACTGCGATCCCCCCCTGCAATAGGAACACGGTCATTGTGCCCCCCCGCCAGCCCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008787 True 1059 mRNA 0.63 1 11833286 11834344

Neighbor

gene id symbol gene type direction distance location
AMCG00008782 LOC107563942 coding upstream 214431 11602415 ~ 11618855 (+)
AMCG00008783 r3hdm2 coding upstream 233649 11567858 ~ 11599637 (+)
AMCG00008778 NA coding upstream 441257 11369713 ~ 11392029 (+)
AMCG00008775 NA coding upstream 497065 11331875 ~ 11336221 (+)
AMCG00008774 LOC106566145,LOC107558166 coding upstream 541986 11279912 ~ 11291300 (+)
AMCG00008791 NA coding downstream 148434 11982778 ~ 12002806 (+)
AMCG00008798 tuba4l,LOC105008555,LOC107706828,LOC107669576 coding downstream 279040 12113384 ~ 12126602 (+)
AMCG00008795 NA coding downstream 298142 12132486 ~ 12143358 (+)
AMCG00008800 NA coding downstream 395183 12229527 ~ 12235458 (+)
AMCG00008799 LOC106565462,LOC106583300,LOC105016995,LOC108424631,LOC106567065 coding downstream 402287 12236631 ~ 12237359 (+)
G51483 NA non-coding upstream 116804 11712712 ~ 11716482 (+)
G51446 NA non-coding upstream 367203 11465812 ~ 11466083 (+)
G51298 NA non-coding upstream 775850 11020216 ~ 11057436 (+)
G51283 NA non-coding upstream 879866 10951077 ~ 10953420 (+)
G51265 NA non-coding upstream 922641 10867935 ~ 10910645 (+)
G51582 NA non-coding downstream 227730 12062074 ~ 12062289 (+)
G51584 NA non-coding downstream 241144 12075488 ~ 12077513 (+)
G51586 NA non-coding downstream 244353 12078697 ~ 12080204 (+)
G51614 NA non-coding downstream 356389 12190733 ~ 12249909 (+)
G51665 NA non-coding downstream 591589 12425933 ~ 12426222 (+)
AMCG00008784 NA other upstream 128873 11694654 ~ 11704413 (+)
G51445 NA other upstream 367798 11460363 ~ 11465488 (+)
G51297 NA other upstream 792612 10984890 ~ 11040674 (+)
AMCG00008752 LOC107666323 other upstream 986850 10828568 ~ 10846436 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other upstream 1061611 10692377 ~ 10771675 (+)
AMCG00008810 NA other downstream 705254 12539598 ~ 12549618 (+)
G51734 NA other downstream 881150 12715494 ~ 12716786 (+)
G51756 NA other downstream 1008371 12842715 ~ 12846233 (+)
G51812 NA other downstream 1090894 12925238 ~ 12926794 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other downstream 1146460 12980804 ~ 12992725 (+)

Expression


Co-expression Network