AMCG00008790


Basic Information

Item Value
gene id AMCG00008790
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 11908698 ~ 11921938 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008790
ATGCCCGGGGGTGGGTTTTCCTCACTCCCTGGTGCGTTGTGCAGCAATCCTGGGTCAGACAGCCCTCAGGATGGGCCAGCGGCCGTGGTTCAGACACGCGGCACGGTCCAGCGACAGCTTAGAATAGGCTCTGACCCGCAGAATCAGTTTGTGTTCGTCAGCAAGGTGGTCTGTTCACAAGGTGTCGGCCTCATATGTTGGAGACATGTTTCCCACCACAACTGGCCATTTGAAGACCTGGGGCAGCGGCTGGGTGTTGGGGTGTCGGGAGTTCTGAACACTCCCCCTCCAGCCCGACTCTTCCCCCACCGCCTCCTCTGGCAGCTGAGCTCCATGTGCCAAGTTGAGTGTGTAAATGAAACCACAGATAAGAAGGTGACGGGAGCCAGAGCCTGCGGAGAGCAGCGGGCCTGGGGAGGGACGCTCGTCTCCTGTCTGAGCGAGACTCGGCTCGTTCCCATGCCAGTGCAGACTGgttttgaaATTTGTGACATCACAGTTTCCATGCTGTTTGTGCCCGCAACGTCCAGCTTTTGCTTTCCAAACTTCGTTACCCCAGAGGAGAGAACTGGGGTTCTCGAGCGCAGTCTCCCCTTTCAGGCTGTTCTTGATCCCGGGTGCACCAGAGATGCATGGCTCTTCTGTGTTCCTGTGGATGCTGCACCGAAGACCTGCAGTCCCAAACAATTTGTGTGTAAAGACCAGATCACCTGCATCTCCAAGGGCTGGCGGTGCGATGGGGAGAAGGACTGTCCCGACGGCTCTGATGAGTCCCCCGATGTCTGTGAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008790 True 792 mRNA 0.57 9 11908698 11921938

Neighbor

gene id symbol gene type direction distance location
AMCG00008789 lrp1,LOC103376578 coding downstream 13235 11882010 ~ 11895463 (-)
AMCG00008788 LOC106565466 coding downstream 30512 11800161 ~ 11878186 (-)
AMCG00008786 NA coding downstream 154285 11747072 ~ 11754413 (-)
AMCG00008785 shmt2,LOC102307393,LOC101478662,LOC103359782 coding downstream 180528 11714662 ~ 11728170 (-)
AMCG00008781 NA coding downstream 357580 11548011 ~ 11551118 (-)
AMCG00008792 NA coding upstream 89619 12011557 ~ 12022986 (-)
AMCG00008793 NA coding upstream 102222 12024160 ~ 12033766 (-)
AMCG00008794 NA coding upstream 113228 12035166 ~ 12066116 (-)
AMCG00008797 NA coding upstream 185944 12107882 ~ 12146340 (-)
AMCG00008796 NA coding upstream 228223 12150161 ~ 12161522 (-)
G51403 NA non-coding downstream 650480 11226487 ~ 11258218 (-)
G51354 LOC100846954 non-coding downstream 744324 11163346 ~ 11164374 (-)
G51344 NA non-coding downstream 768425 11057677 ~ 11140273 (-)
G51261 eif4b non-coding downstream 1069026 10839106 ~ 10839672 (-)
G51251 krt18,LOC107727028,LOC107551541,LOC100692632,LOC102212553 non-coding downstream 1104989 10801108 ~ 10803709 (-)
G51574 NA non-coding upstream 80987 12002925 ~ 12010394 (-)
G51588 NA non-coding upstream 159274 12081212 ~ 12093785 (-)
G51634 NA non-coding upstream 421202 12343140 ~ 12343342 (-)
G51674 NA non-coding upstream 516813 12438751 ~ 12439523 (-)
G51693 NA non-coding upstream 532981 12454919 ~ 12476199 (-)
AMCG00008777 dctn2,LOC102785932 other downstream 582339 11235642 ~ 11326359 (-)
G51250 NA other downstream 1109544 10797632 ~ 10799154 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other downstream 1190497 10670949 ~ 10718201 (-)
G51241 NA other downstream 1196213 10675756 ~ 10712485 (-)
AMCG00008744 NA other downstream 1305325 10560866 ~ 10603373 (-)
AMCG00008815 NA other upstream 679353 12601291 ~ 12605260 (-)
G51797 NA other upstream 968873 12890811 ~ 12891597 (-)
G51799 NA other upstream 973397 12895335 ~ 12897134 (-)
G51867 NA other upstream 1078888 13000826 ~ 13001888 (-)
AMCG00008845 NA other upstream 1168599 13090537 ~ 13097934 (-)

Expression


Co-expression Network