AMCG00008793


Basic Information

Item Value
gene id AMCG00008793
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12024160 ~ 12033766 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008793
CCCAGTGCTGGCTGGAATGGTACATCTCAGGCTTCCATCAATGCAGTTGCTCTACCTGGATGTTGCTAGAATGTCCTTTTTAGCACAAGGGaggggggagtgagagagagagagggaactgCACTGGCGCTGGATTAGCCTACTATTGCGGTATTAAgggtcttttttttgtttttttgcaaaccAGTTACAGAAGCAAGTCAGGGATTCGCAgactctctgtttctctctgtatcGGTCTCATCTGTCCATCTTTCTCAGCCTCTGGTCTGTTTTGCAGTATTTGGTCAGAGACAGCAGGCAACTGAAGCAGGGAAGAATAAGCAGCTTTATTCAGTCTCCAGAGATAAACAACCGCAGCAACAACAGGAGGGAGACGCTGCCACTATGACTCAGGGGAAGATCTCGGTGACAAACAAGACGGCTAATGGGCCAGAGGGAGGGGGAGCTATGACCACAGCCCCGCCCAGCTATGAGGAAGCCACAGCGCCAGACAACAAGACTAGCGCGGGACCCCCGCCTCCCCCCAGCGTCCCCCTGCACCCCAGCTGGGCCTACGTGGATCCCAACACCAGCCCGAGCTACAGCAACGGCGGTTACGCTGGTGACGGAGAGATGCTGACAGAATTCAGCTGGGACGACAAAAACATCCGCCGggtcttcatcaggaagGTCTACGTCATCCTGATGATCCAGCTGGCTGTCACCGTGGCCATTGTCGCCCTCTTCACCTTCTGTGCAGTGTTCTTCATCACCTACCTGACCCTATCCTGCTGCAGTGGACCAagGAGGCAGTTTCCCTGGAACCTGATCCTGCTGGCTGTGTTTaccctctccctctcttacaTGACAGGGATGCTGTCCAGCTACTACAATACCaagtctgtgctgctgtgtctgGGGATCACGGCCCTGGTCTGCCTGTCCATCACGATCTTCAGCTTCCAGACCAAGtttgaCTTCACCTCCTGCCAGGGTGTGCTGTTTGCACTGGTGATGGTGATGTTCTTCAGTGGTATTATCCTGGCAGTGGTCCTGCCATTCGGATATGTGCCCTGGTTGCAAGCACTCTACGCAGTTCTGGGGGCAATTCTTTTCACCATGttCTTGGCGTTTGACACCCAGTTGCTGATGGGGAACCGGCGCTATGCTATGAGTCCAGAGGAATACATCTTCGGAGCTCTCAACATCTACCTGGATATTATCTATatcttctccttcttcctccAGATATTTGGTTCCCAGAGAGAATAACGCCCCTCCCCCCCAAGTACTTATCCTCATCGCCCAGTGACTCCCcccatttcaaacaaaaaacgtCTCAACCTGCATCCACTAAGCTTCCAACTGGCATAGATGTAGTGTTGCACTGGTGtagtcttttcatttctttattttgtaaatcagaaGCTTTAAAACTGGCAGGAgctgtttgttctcagatccttttattcttattgttgTACAGCTAGCTTGCATAAAATTAAACGTGTTTATTTTAGACATAGCTGTCATCTCTGTCACCCTCCCATCTGTTTGCTGAGCTGAAGGAATTGGGGAGTACAGAGTATTGCTTCCATTCCTGTCTCCTGTTTTGGGGATGTGCTCGGCTCAACTGCTTTTAATACACTCGCATGTTCTGGGACCGCAATCTACTTAGCCACTATGCACCggttaaaaaaggaaaccaaaaaaatatatacatcggAAATTAGTttggaaaagtaaaatatttttctatcaCCTTTTACGATGAGGAAAGCAATGTTCTAGAGTGTAGGGAGGTTACCTCGGGTCTTCCATTCCATCCTTGTGTCACTTTCTATCCCAGCTGATCTCCAATGATTGGATTTGTCTTCGGACGTAGGTCAGTTAAGAAGTGGAGGCTCGGTTTCACTAGCTGATCAGAGGGGTTATGACAGGACCCCTGcactgctgatttttgttccaatagagctctaaattacttaattgaactgtaTACTGCATTGTTCAATTAATGATTcaaataagcaattaagatctgTAGCACAAAAACCAACAGAGATTATGGGATAGgagctgctgtttgtgctgtttgGAATGGGGATGGAAGTGCAAGAACCCTCCATACTGACTCGGCGGGCTGCGTTGCTACAGAAGGAGTTCTCCAGACCTGCCCTCCACACTGGCCTGCATGCTTAACCCTTTGTGTGCATGCTTGCTAGTGCTTCAGTACTGTGTCCAGACTGTATAGCACCTTTCGCTTCTTGCCCACCACATTGCTGCATTGTAACGCAGACCATGCAACCACCGCTGTCCTTGCTCTGAATGTTAAGGAGGCAGCAGTACTACTTCTAagactactactaataatagtagTATACTGGGGGACgataggtttaaaaaaatatcttccTGAAGGTAGTTAGCGTGCAATGTGCAGTTTGTCTGCAGAGTGAAGTGTCAATCTGTACATCGAAGCTCCTGCAGCTCGGCCCAACCTTCTTTCCCGAGTTTAGCTGTACAGAATTTTGTAAAACTTGTATGTGTGcctgttttcttcatttatgCATTGAGTGATTTATTTGAACATTAAATTTTGCTTCTGATAGAAATATAGGGTTCGAAACCCTTTGTGAGCCATTTCTCCTTAGGAGTCATGTCAAGTAGACTTAGCAGCTGTCTCTCGTTGTTGCCTCTGTAGTGTCATTCTTGTGTGTTGCCCCGGGGAGATGTGGGACGCCAAAGAGAGGAGCACACTGCTAACATTTTCTTCTGCCTTCACTTGGTACCGAGAGATCAAAATGTGAGGCTGGAGTACTGGAGAGAGACTCACCGGTGGTTGACAAGATATTAATGGCGTAGTTGCAAAGCTGGAGCTCACAATAGTGCAAGTGCAAATGCAAGCTATGGAAATGTTTGCCAGTCTCGTTTCTTTAGGGTGTTTCTGGGTTGGGAGTTTGAGTTTTTTTGGAGCGAGTTATTCCACAGTAGTAGTCCTTTTCTTGATTTATTCCTAACTAACTGTATTGGTGGCCTTCAGGAATAATGACAAACGTCACAACAAGGAGAATGGCGGGTGTGTGGTTGTGGGAACTTCGGTGTTAAGGTGTATCCGgaagaggatttatttttccccccccgACACTAACGAGgatgtgtacagtatataaataccTACGGATAGATTCAAATCTGCACTTCGCGTTGATCCGATAGTTTTGTGTCGTGTAATTAGCCTGCTCCAAATCGCATCACCAGCCTGCTCTGTTGTGCACACATTGAAACATGactataattgttttaattgatttatttttttgagaaatgaatgaatatatatatacatatattgtattttctctaCATTGctaataaattattcaatatgATCTTCATCCA

Function

GO: NA

KEGG:

id description
K24205 TMBIM, LFG; protein lifeguard

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008793 True 3384 mRNA 0.46 11 12024160 12033766

Neighbor

gene id symbol gene type direction distance location
AMCG00008792 NA coding downstream 1174 12011557 ~ 12022986 (-)
AMCG00008790 NA coding downstream 102222 11908698 ~ 11921938 (-)
AMCG00008789 lrp1,LOC103376578 coding downstream 128697 11882010 ~ 11895463 (-)
AMCG00008788 LOC106565466 coding downstream 145974 11800161 ~ 11878186 (-)
AMCG00008786 NA coding downstream 269747 11747072 ~ 11754413 (-)
AMCG00008794 NA coding upstream 1400 12035166 ~ 12066116 (-)
AMCG00008797 NA coding upstream 74116 12107882 ~ 12146340 (-)
AMCG00008796 NA coding upstream 116395 12150161 ~ 12161522 (-)
AMCG00008801 NA coding upstream 203659 12237425 ~ 12240059 (-)
AMCG00008802 NA coding upstream 214534 12248300 ~ 12259331 (-)
G51574 NA non-coding downstream 13766 12002925 ~ 12010394 (-)
G51403 NA non-coding downstream 765942 11226487 ~ 11258218 (-)
G51354 LOC100846954 non-coding downstream 859786 11163346 ~ 11164374 (-)
G51344 NA non-coding downstream 883887 11057677 ~ 11140273 (-)
G51261 eif4b non-coding downstream 1184488 10839106 ~ 10839672 (-)
G51588 NA non-coding upstream 47446 12081212 ~ 12093785 (-)
G51634 NA non-coding upstream 309374 12343140 ~ 12343342 (-)
G51674 NA non-coding upstream 404985 12438751 ~ 12439523 (-)
G51693 NA non-coding upstream 421153 12454919 ~ 12476199 (-)
G51700 NA non-coding upstream 469696 12503462 ~ 12503679 (-)
AMCG00008777 dctn2,LOC102785932 other downstream 697801 11235642 ~ 11326359 (-)
G51250 NA other downstream 1225006 10797632 ~ 10799154 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other downstream 1305959 10670949 ~ 10718201 (-)
G51241 NA other downstream 1311675 10675756 ~ 10712485 (-)
AMCG00008744 NA other downstream 1420787 10560866 ~ 10603373 (-)
AMCG00008815 NA other upstream 567525 12601291 ~ 12605260 (-)
G51797 NA other upstream 857045 12890811 ~ 12891597 (-)
G51799 NA other upstream 861569 12895335 ~ 12897134 (-)
G51867 NA other upstream 967060 13000826 ~ 13001888 (-)
AMCG00008845 NA other upstream 1056771 13090537 ~ 13097934 (-)

Expression


Co-expression Network