AMCG00008809


Basic Information

Item Value
gene id AMCG00008809
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12399412 ~ 12415105 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008809
ATGTCATGTCCCAACAACGTGGCGGCGGGTTCCTTTCTCATGGATTCTCTCATGGGCTCCAACGCGTACCGAGGTGAGGGCTACACGGCCAGCCCGGGGATTTACATGCAAACGGGCGCTGAGTATGGCTGTGCAGTGATGAGAAACTGTGGGATTGTACCATCCCCTCTCTCCAAAAGAGACGAGATCAGCCCGGCCAACCTGCCGCTCAGCGCCTACCACCACCCGTCTTACCTGCCGCAGCTGGACACCTGGGGGGCAGACCCTAAAAGTTCCTGCAGGATCGAGCAACCTGTTGCCAGACCTTTGCCCTCCTGCTCCTTCCCAGCCGCCAATGTCAAAGAGGAGGCGATGTGCTGCATGTACAGAGCAGACATCAGCGGGGCGAAGGAGGCTGCCGAACCGACCACCTACACCCGACTTGGGGCGGGGAGCAGCCAGCCCGAGCGCGCCGTGCCAGTGCCGGGCTACTTCCGAGTCGCCCAGGGTTACCCGGGGGAGAAGGCGCAAGACGCGGACGAGTTCGGCCCCGGTTTCGCCTCGGTGGTGAGCAGTTTGACCCCTCCAGTTGACACCAGCGGGACGCCTCCACTGCCCACCGCCGAATCCAAGCCAGAACAGCAGACAGACACCGCCGAGATCAAGGACGAGGACCCCACCGCGGCGAAGAGATTATCCGAGCTGGACAGGGAGAGCTACCCCAAGACAGACAGCAGTACAGACGCCTCGGACACCGAAGTCAAAGCTCACCCTGACCCAGCCTCAACGCCCGGGTACCCAAGTGGGTTTGACCGTGGAGCCGTGACCTCCAGAGCGGATCAGATCAGACGGGAAAGGCGACAGGGAGTtaaagagggggagagggaggggaaggagaaagaggGGTTACCGTGCGAAACCTTATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008809 True 906 mRNA 0.62 2 12399412 12415105

Neighbor

gene id symbol gene type direction distance location
AMCG00008808 hoxc11,hoxc11a,LOC108433364 coding upstream 13110 12385580 ~ 12386302 (+)
AMCG00008803 NA coding upstream 40047 12358727 ~ 12359365 (+)
AMCG00008804 hoxc13,LOC107715003 coding upstream 60676 12337886 ~ 12338736 (+)
AMCG00008799 LOC106565462,LOC106583300,LOC105016995,LOC108424631,LOC106567065 coding upstream 162053 12236631 ~ 12237359 (+)
AMCG00008800 NA coding upstream 163954 12229527 ~ 12235458 (+)
AMCG00008807 NA coding downstream 7609 12422714 ~ 12423406 (+)
AMCG00008806 hoxc8,hoxc8ab coding downstream 19518 12434623 ~ 12435063 (+)
AMCG00008805 hoxc6ba,LOC108433405,LOC103034651 coding downstream 47933 12463038 ~ 12465622 (+)
AMCG00008812 NA coding downstream 53711 12468816 ~ 12469543 (+)
AMCG00008811 hoxc4 coding downstream 89151 12504256 ~ 12505029 (+)
G51614 NA non-coding upstream 149503 12190733 ~ 12249909 (+)
G51586 NA non-coding upstream 319208 12078697 ~ 12080204 (+)
G51584 NA non-coding upstream 321899 12075488 ~ 12077513 (+)
G51582 NA non-coding upstream 337123 12062074 ~ 12062289 (+)
G51483 NA non-coding upstream 682930 11712712 ~ 11716482 (+)
G51665 NA non-coding downstream 10828 12425933 ~ 12426222 (+)
G51673 NA non-coding downstream 23746 12438851 ~ 12439523 (+)
G51685 NA non-coding downstream 88811 12503916 ~ 12504176 (+)
G51710 NA non-coding downstream 144366 12559471 ~ 12559699 (+)
G51718 NA non-coding downstream 231418 12646523 ~ 12647964 (+)
AMCG00008784 NA other upstream 694999 11694654 ~ 11704413 (+)
G51445 NA other upstream 933924 11460363 ~ 11465488 (+)
G51297 NA other upstream 1358738 10984890 ~ 11040674 (+)
AMCG00008752 LOC107666323 other upstream 1552976 10828568 ~ 10846436 (+)
AMCG00008749 krt8,LOC108429286,LOC107705699,LOC107666380,LOC107681386,LOC107559866,LOC108411779,LOC106935308,LOC103152763,LOC102227940,LOC106915440 other upstream 1627737 10692377 ~ 10771675 (+)
AMCG00008810 NA other downstream 124493 12539598 ~ 12549618 (+)
G51734 NA other downstream 300389 12715494 ~ 12716786 (+)
G51756 NA other downstream 427610 12842715 ~ 12846233 (+)
G51812 NA other downstream 510133 12925238 ~ 12926794 (+)
AMCG00008837 march9,LOC107664138,LOC107593952,LOC107714987,LOC106583285 other downstream 565699 12980804 ~ 12992725 (+)

Expression


Co-expression Network